Phytobacter sp. MRY16-398: MRY16398_53660
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Entry
MRY16398_53660 CDS
T05735
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00730
Thiamine metabolism
mety01100
Metabolic pathways
mety01240
Biosynthesis of cofactors
Module
mety_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MRY16398_53660 (thiC)
Enzymes [BR:
mety01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MRY16398_53660 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BBE80310
UniProt:
A0A348DLE3
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All DBs
Position
5591278..5593173
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AA seq
631 aa
AA seq
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MSANQLTRREQRAQAQHFIDTLEGTAFPNSKRIYITGSQPDIRVPMREIQLSPTLIGGSK
DNPQYEENEAIPVYDTSGPYGDPNVAIDVQQGLAKLRQPWIDARDDTEKLRDRSSVYTKE
RLADDGLNDLRFSGLLTPKRAKAGQRVTQLHYARQGMVTPEMEFIAIRENMGRERIRGEV
LRKQHPGHGFGANLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAENLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHKENFLYEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AAAQTIEVGMADMSENFRAKGGEIYLKKEEV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatcaacttacacgccgtgaacaacgcgcccaggcgcagcattttatcgac
acgctggaaggcaccgctttcccgaactcaaaacgtatctacatcaccggctcacagcct
gatattcgtgttccgatgcgtgaaatccagcttagcccgacgcttatcggcggctcgaag
gacaaccctcaatacgaagaaaacgaggcgattccggtctatgacacgtccggtccctat
ggcgacccgaatgtggctatcgatgtacagcaggggctggcgaaactgcgtcagccgtgg
atcgatgcccgcgacgataccgaaaaactgcgcgatcgcagttcggtatacaccaaagag
cggcttgcggatgacggcctgaacgacctgcgttttagcggcttactgacaccgaaacgg
gccaaagcgggtcagcgcgtcacccagttgcattatgcgcgtcaggggatggtgaccccg
gagatggagtttatcgccatccgtgaaaatatgggccgcgagcgtatccgcggtgaggtg
ttgcgcaagcagcatcctggccacggctttggcgctaacctgccagaaaatatcaccccg
gaatttgtgcgcgacgaagtggctgccggacgcgccatcatccccgccaacatcaaccac
ccggagtcggaaccgatgatcatcggccgcaatttcctggtgaaggtgaatgccaacatc
ggcaactccgcggtcacctcctccatcgaggaagaggtggaaaaactggtgtggtcaacc
cgctggggtgccgatacggtgatggatctgtcgacgggccgctatattcatgaaacccgc
gagtggatcctgcgtaacagcccggtgccaattggtactgtaccgatctaccaggcgctg
gagaaggtgaacggcatcgccgaaaacctgacatgggaagcgttccgcgacaccctgctg
gagcaggctgagcaaggcgtggactacttcaccatccacgcgggcgtgttgctgcgctac
gtgccgatgaccgccaaacgcctgaccggcatcgtgtcacgcggcggttcgattatggcg
aaatggtgcttatcccatcacaaagaaaacttcctctacgagcacttccgcgaaatctgc
gaaatctgcgccgcctatgatgtctcactgtcgctgggcgacggcctgcgacccggctcc
attcaggacgccaacgacgaagcgcaattcgccgagctgcacacgctgggcgagctgacc
aaaattgcctgggaatacgatgtgcaggtgatgattgaaggccctggccacgtaccgatg
cagatgatccgccgcaatatgaccgaagagctggagcactgccatgaggcgccgttctac
acgctggggccgctgaccaccgatatcgcgccgggttacgaccacttcacctccgggatt
ggcgcggcgatgatcggctggtttggctgcgccatgctctgctatgtcacgccaaaagag
cacctcggtttgccaaacaaagaggatgtgaagcaagggctgattacctacaagatcgcc
gcgcatgccgcggatctcgccaaaggccatcccggcgcgcagatccgcgataacgccatg
tccaaagcacgtttcgaattccgctgggaagaccagttcaacctggcgctcgacccgttc
accgcccgtgcgtatcacgatgaaaccctgccgcaggagtcgggcaaagttgctcacttc
tgctccatgtgcgggccgaaattctgctcaatgaaaatcagccaggaagtacgcgattac
gccgcagcccagaccatcgaagtggggatggcggatatgtcagaaaacttccgtgccaaa
ggcggtgagatctatctcaaaaaggaggaggtctga
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