Phytobacter sp. MRY16-398: MRY16398_53960
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Entry
MRY16398_53960 CDS
T05735
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00071
Fatty acid degradation
mety00280
Valine, leucine and isoleucine degradation
mety00310
Lysine degradation
mety00362
Benzoate degradation
mety00380
Tryptophan metabolism
mety00410
beta-Alanine metabolism
mety00640
Propanoate metabolism
mety00650
Butanoate metabolism
mety00907
Pinene, camphor and geraniol degradation
mety00930
Caprolactam degradation
mety01100
Metabolic pathways
mety01110
Biosynthesis of secondary metabolites
mety01120
Microbial metabolism in diverse environments
mety01200
Carbon metabolism
mety01212
Fatty acid metabolism
Module
mety_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MRY16398_53960 (fadB)
00650 Butanoate metabolism
MRY16398_53960 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MRY16398_53960 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MRY16398_53960 (fadB)
00310 Lysine degradation
MRY16398_53960 (fadB)
00380 Tryptophan metabolism
MRY16398_53960 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MRY16398_53960 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MRY16398_53960 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MRY16398_53960 (fadB)
00930 Caprolactam degradation
MRY16398_53960 (fadB)
Enzymes [BR:
mety01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MRY16398_53960 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MRY16398_53960 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MRY16398_53960 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MRY16398_53960 (fadB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBE80340
LinkDB
All DBs
Position
5631970..5634159
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYINWLEDGIAELVFDAPGSVNKLDTATVASLGQALDMLEKQADLKGLLLRSE
KAAFIVGADITEFLSLFLVPAEQLSTWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGAEEALK
IGLVDGVVQPEKLKAGAVAILRQAINGDLDWRAKRQPKLEPLHLSKIEATMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALKLENQSFVPLAHSKEARALVGIFLNDQYVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMSEAGKLL
NKQLERGKIDGLKLAGVISTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEEKVSP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDKTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKVFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP
KKEEDAEVNALLAEVSQPKRDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAHQFQHLGPLYEAPAGLREKARHNEAYYPPVEPA
RPAGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgataccctatatatcaactggctggaagatggcattgccgaactg
gtgttcgatgcccccgggtcggtgaataagttagacacggcaaccgtagccagcctcggc
caggcgctggacatgctggaaaaacaggcggatttaaaaggcctgctgctgcgctcagaa
aaagcggcgtttattgtcggtgccgatattaccgaattcctctctctgttcctggttccg
gcagaacaactgagtacctggctgcactttgccaatagcgtgttcaatcgcctggaagat
ttgccggtaccgaccatttctgccgtaaacggctatgcgctgggcggcggctgcgagtgc
gtgctcgccaccgactaccgtctggcgacgccggatctgcgcatcggtctgccggaaacg
aaactgggcatcatgcctggttttggcggttccgtccgtatgccacgtctgctgggcgcc
gacagtgcgctggaaatcattgccgccgggaaagatgttggcgccgaagaggcgctgaaa
attggcctggtcgatggcgtagttcagccggaaaaattaaaagcaggcgcagtggcgatt
ttacgtcaggcgattaacggcgatctcgactggagagccaaacgccagccgaagctggag
ccgctgcacttaagtaaaatcgaagccaccatgagctttacgattgccaaaggtatggtc
gcgcagacagcaggtaaacattaccccgcccccataacagcggttaaaaccattgaagca
gccgctcgctttggccgtgaagaagccctgaaacttgaaaatcaaagttttgttcctctg
gcgcacagtaaagaagcccgcgcactggtcggtattttcctcaacgatcaatacgtgaaa
ggcaaagcgaaaaaactgaccaaagatgtcgagacaccaaaacaggccgccgtgctgggt
gcgggtattatgggcggcggtattgcttaccagtctgcctggaaaggcgtgccggtcatt
atgaaagacatcaatgacaaatcgctgacgctgggtatgagtgaagcgggtaagctgctt
aataaacagcttgaacgcggcaaaatcgatggactaaaactggcgggggtcatttccact
attcacccgaccctcgactatgccggctttgagcgcgtggatgtcgtagtcgaagcggtt
gttgaaaacccgaaagtgaaaaaagccgttctcgcagaaaccgaagaaaaggtaagcccg
gataccgtcctggcgtcaaacacctccacgatcccgatttccgaactggcaagcgtgctt
aaacgcccggaaaacttctgcgggatgcacttctttaacccggtacaccgtatgccgctg
gttgaagtcattcgcggtgaaaaaacgtctgataaaaccatcgctaaagtcgtggcatgg
gcgagcaaaatgggcaaaacaccgatcgtggtgaatgactgcccgggattcttcgtcaat
cgcgtgttgttcccttattttgccggctttagccagttgctgcgtgacggtgcggatttc
cgcaaagtcgataaagttatggagaaagtctttggctggccaatgggcccagcatatttg
ctggatgtggtcggtatcgacacggcgcatcacgcgcaagccgtcatggcggcgggcttc
ccgcagcggatgcagaaagattatcgcgatgctatcgacgcgctgttcgacgctaaccgt
ttcgggcagaaaaatggccttggcttctggcgctataaagaagacagcaaaggcaaaccg
aagaaagaagaagatgccgaggtaaatgccctgctggcagaagttagccagccgaagcgt
gactttagcgacgatgagattatcgcccgtatgatgatcccgatggtcaacgaagtggtg
cgctgcctggaagaaggcattatcgccagcccggcagaagccgatatggcgctggtctac
ggtctcggtttccctccgttccacggcggggcattccgctggctcgacacgcttggcagc
gcaaaatatctcgatatggcgcatcagttccagcacctcggcccgctctatgaagccccg
gccgggctgcgcgagaaagcgcgccacaacgaagcgtattatcccccggttgaacctgcc
cgtccggcaggtgaactgaaaacggcttaa
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