Phytobacter sp. MRY16-398: MRY16398_54280
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Entry
MRY16398_54280 CDS
T05735
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRY16398_54280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mety03019
]
MRY16398_54280 (recQ)
03400 DNA repair and recombination proteins [BR:
mety03400
]
MRY16398_54280 (recQ)
Enzymes [BR:
mety01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MRY16398_54280 (recQ)
Messenger RNA biogenesis [BR:
mety03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MRY16398_54280 (recQ)
DNA repair and recombination proteins [BR:
mety03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MRY16398_54280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF6972
zf-CXXC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBE80372
UniProt:
A0A348DLK5
LinkDB
All DBs
Position
complement(5663120..5664949)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLESTALEVLRETFGYQQFRPGQQHIIDTVLGGRDCLVVMPTGGGKSLCYQIP
ALILPGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLY
IAPERLMLDNFLEQLTHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQYLPSVPFMAL
TATADDTTRRDIERLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLLRYVHDQRGKSGI
IYCNSRAKVEDTAARLQSRGFSAAAYHAGLENAVRASVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYAPEDMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEACGNCDICLDPPKQYDGLKDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRELGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
LVTQNIAQHSSLQMTDAARPVLRGEVPLQLAVPRVVALKSRVMQKAAVGNYDRKLFAKLR
KLRKAIADENNVPPYVVFNDATLIEMAEQMPITPGEMLGVNGVGVRKLERFGQEFMALIR
AHVDGDDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatctggaatcgacagccctggaagttttacgggaaacc
ttcggctaccagcagttccgtccgggtcagcaacatatcattgataccgtgctcggcggc
cgcgactgtctggttgtcatgccgaccggtggcggcaaatctctctgctatcaaattccg
gcgctgattctgcctggcctgacggtggtggtatcgccgctgatctccctgatgaaagat
caggttgatcagttactggcgaacggcgttgctgcggcctgtctgaactcaacacaaagt
cgtgaacaacagcttgaggtgatggctggctgccgcaccggacaaatccgtctgctgtat
atcgcccctgagcggctgatgcttgataactttcttgagcaactgacgcactggaacccg
gtacttctggcggtggatgaagcgcactgtatctcccagtggggtcatgatttccgcccg
gaatatgccgcactgggccagcttcgtcagtatctgccgtctgtgccttttatggcattg
accgccacggcggatgacaccacccgtcgcgatattgaacgtcttctggggctgaacgac
ccgctgattcagatcagcagttttgaccgacccaatatccgctacatgctgatggagaaa
ttcaaaccgctcgatcagcttttacgctatgtacatgaccagcgcggcaagtccggaatt
atttactgcaacagtcgggcgaaggtggaagacaccgccgctcgcctgcaaagccggggt
tttagcgccgcggcgtatcatgccgggctggaaaacgcggtgcgcgccagcgtgcaggag
aaattccagcgcgatgatctgcaaatcgtggtcgcgaccgtcgcattcggtatgggaatt
aacaaacccaacgtgcgatttgtggttcacttcgacattccgcgtaatatcgagtcttac
tatcaggaaaccggccgtgccgggcgtgatggcctgcccgccgaggcgatgctgttctac
gcgccggaagacatggcctggctgcgccgttgccttgaagaaaaaccggccgggcaattg
caggatattgagcgtcataagctcaatgcgatgggggcctttgcggaagcgcaaacctgc
cgccgtctggtcttgctcaattactttggcgaagggcgtcaggaagcctgcggtaactgc
gatatctgccttgatccgccgaaacagtatgatggcctgaaggatgcgcaaattgcgctc
tcgaccattggtcgcgtcaatcagcgtttcgggatgggctatgtggttgaggtgatccgt
ggggcgaataaccaacgtatccgtgaactcggccacgataagcttaaggtctacggcatg
ggccgggaaaaaagccatgagcattgggtaagcgtgattcgccagcttattcatttgggg
ctggtcacgcagaacatcgcccagcattcatcgttacagatgacggatgccgcgcgtccg
gtgctgcgtggcgaggttccgttgcaactcgccgtgccgcgtgtggtcgcgctgaaatcc
cgggtgatgcagaaggcggcagtcggcaactatgatcgcaaactcttcgctaagctgcgc
aaattacgtaaagcgattgccgatgaaaacaacgtgccgccgtatgtggtcttcaacgac
gcaacgctgattgaaatggccgaacagatgcccattacgccaggtgaaatgctcggggtt
aacggcgtaggcgtacgtaaacttgagcgctttggtcaggagtttatggcgctgattcgt
gcccatgtggatggcgatgatgacgagtag
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