Phytobacter sp. MRY16-398: MRY16398_56050
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Entry
MRY16398_56050 CDS
T05735
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety03030
DNA replication
mety03410
Base excision repair
mety03420
Nucleotide excision repair
mety03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRY16398_56050 (polA)
03410 Base excision repair
MRY16398_56050 (polA)
03420 Nucleotide excision repair
MRY16398_56050 (polA)
03440 Homologous recombination
MRY16398_56050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mety03032
]
MRY16398_56050 (polA)
03400 DNA repair and recombination proteins [BR:
mety03400
]
MRY16398_56050 (polA)
Enzymes [BR:
mety01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRY16398_56050 (polA)
DNA replication proteins [BR:
mety03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MRY16398_56050 (polA)
DNA repair and recombination proteins [BR:
mety03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MRY16398_56050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MRY16398_56050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBE80549
UniProt:
A0A348DM32
LinkDB
All DBs
Position
complement(5857791..5860577)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTVLGPEEVVTKYGVPPGLIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAELSFRGAKNMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQQPIADTLLNLFKKYEFKRWITDLEGGKWLQAK
GAKPATKPQETVVVEAEAEVSAAVLSFDNYVTILDEDVLNEWIAKLKKASVFAFDTETDS
LDNISANLVGLSFATEPGVAAYIPVAHDYLDAPAQISRDRALELLKDLLEDEKVQKVGQN
LKYDRGILQNYGIELRGIAFDTMLESYTLDSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIDLEQAGRYAAEDADVTLQLHLKMWPELQKNAGPLNIFQNIEIPLVPVLSRV
ERNGVNIDPAVLHKHSEEIALRLAELEKKAHEIAGEPFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPKDYVIVSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLDYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQTEKPRVKMIMQVHDELVFEVHKDDVDAVSQKI
HELMESSTKLDVPLLVEVGSGQNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgttgacggctcttcctatctctaccgc
gcataccatgcgtttccgccgctgactaacagtgcaggcgagcctactggcgctatgtac
ggcgtcctgaatatgctgcgcagtctgatcctgcagtatcagccgacacatgccgcagtg
gtgtttgatgcgaagggcaaaacgttccgtgacgaactgtttgagcactataaatctcac
cgtccgccaatgccggacgatctgcgcgcgcagatcgagccattgcatgaaatggtcaaa
gcgatggggctaccgctgctggccgtttcgggcgtagaggctgacgatgttatcggcacg
ctggcgcgcgaagccgaaaaagcagggcgtccggtcctgatcagtaccggcgataaagac
atggctcagttggtaacgccaggtattacgcttatcaacaccatgaccaatactgtcctg
gggccagaagaggtcgtaaccaaatacggcgtgccgccggggttgatcatagatttcctc
gctttaatgggcgactcttcagataacattcccggtgttccgggcgtgggcgaaaaaacc
gcacaggcgttattacaagggcttggtggcctggatacgctgtacgccgagccggaaaag
attgccgaactctctttccgtggcgccaaaaatatggcggcgaagctggagcaaaataaa
gaggtggcttacctctcttatcaactggcgaccattaaaacggatgttgagctggagctg
acctgcgaacagttggaagttcaacaaccgatagcagatacgctactcaacctatttaaa
aaatatgaattcaagcgctggattacggatctggaaggcggtaaatggctccaggcaaaa
ggtgctaaaccggccacgaagccgcaagagacggttgtcgttgaagctgaggccgaagtg
tctgctgcggtcctgtcgtttgataactacgtcaccatccttgatgaggacgtgttaaac
gagtggattgcgaaactcaaaaaagcgtcagtgtttgccttcgataccgaaacggacagt
ctggataacatcagcgctaatctggtggggctctcgtttgcgaccgaacctggggtagcc
gcttatatcccggtcgcgcatgactacctggatgcaccagcccagatttctcgcgatcgg
gcgctcgaattactgaaagacctgcttgaagatgagaaggtccaaaaagtggggcagaac
ctcaaatatgaccgtggcattttgcagaattatggcattgagctgcgtggcattgccttt
gacaccatgctggaatcctacacgctggatagtgtcgccggtcgtcatgatatggacagc
ctgtctgatcgctggttaaagcataaaaccattacatttgaagagattgcgggtaaaggc
aaaaaccaactgacctttaatcagatcgatctggagcaggccgggcgttatgctgcggaa
gatgcggacgtcacgctgcaactgcacctgaaaatgtggccggaattgcaaaagaatgct
ggccctttaaatatcttccagaacatagagattcctctggtaccggtgctttcccgcgta
gagcgtaatggcgttaatatcgatcctgcggtgctgcacaaacattcggaagaaattgcc
ctgcgtctggcggaattagagaagaaggcccatgaaatcgcaggcgagccttttaacctt
tcctcaaccaaacagctacagacgattctctttgaaaaacagggcatcaaaccgctgaag
aagacaccgggcggcgcaccgtcaacctccgaggaagttctggaagaactggcgctggat
taccctttacccaaagtcattcttgagcaccgtggtttgtcgaaactgaaatcgacttac
accgataagctgccgctgatgatcaatccaaagaccgggcgcgtacacacttcctatcac
caggctgtcacggcgaccgggcgtctgtcctccaccgatcccaacttacaaaacattccg
gtgcgcaatgaggaaggccgacgtattcgccaggcgtttatcgcgccaaaagactacgtc
attgtttccgctgactactcgcaaattgaattgcgcattatggcgcatctgtcgcgggat
aaaggcctgctctctgcctttgccgaagggaaggatatccaccgtgcaacggcggcagaa
gtgtttggtttaccgctggaaagcgtgtcgaatgaacagcgacgcagcgcgaaagctatc
aacttcggtctgatttatggcatgagcgcgtttggtttatcccgccagctcaatatcccg
cgtaaagagtcgcagaagtatatggatctctacttcgaacgctatccgggtgtactggat
tatatggagcgcacccgcgcacaggcgaaagagcagggctatgttgaaaccctggaaggg
cgtcggctctatctgccggacatcaaatccagtaacgcagcgcgtcgggccggtgcagag
cgtgcggctatcaacgcacccatgcagggcacggcagcagacattatcaaacgcgcaatg
attgctgttgatgcgtggctgcaaacggaaaaaccgcgcgtgaaaatgatcatgcaggta
cacgatgaactggtatttgaagtgcataaagacgatgtggatgcggtatcgcaaaagatc
cacgagttgatggaaagcagtaccaaactggatgtgccgctgctggtggaagtcggtagt
gggcaaaactgggatcaagcgcactaa
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