Methanothermobacter sp. MT-2: METMT2_0038
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Entry
METMT2_0038 CDS
T05694
Name
(GenBank) conserved hypothetical protein
KO
K07466
replication factor A1
Organism
metz
Methanothermobacter sp. MT-2
Pathway
metz03030
DNA replication
metz03420
Nucleotide excision repair
metz03430
Mismatch repair
metz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METMT2_0038
03420 Nucleotide excision repair
METMT2_0038
03430 Mismatch repair
METMT2_0038
03440 Homologous recombination
METMT2_0038
03460 Fanconi anemia pathway
METMT2_0038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metz03000
]
METMT2_0038
03032 DNA replication proteins [BR:
metz03032
]
METMT2_0038
03400 DNA repair and recombination proteins [BR:
metz03400
]
METMT2_0038
Transcription factors [BR:
metz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
METMT2_0038
DNA replication proteins [BR:
metz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
METMT2_0038
DNA repair and recombination proteins [BR:
metz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
METMT2_0038
MMR (mismatch excision repair)
METMT2_0038
DSBR (double strand breaks repair)
HR (homologous recombination)
METMT2_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
OB_MEIOB_N
DUF5088
POT1
tRNA_anti_2
DZR_2
DUF7129
zf-dskA_traR
Zn_Ribbon_TF
DZR
Motif
Other DBs
NCBI-ProteinID:
BAW30740
UniProt:
A0A3G9D057
LinkDB
All DBs
Position
complement(47470..49836)
Genome browser
AA seq
788 aa
AA seq
DB search
MKKEILEEYEKVKDKISKEEFLKRFEEIKEEYDVGFMDDIDIARMIVGEYLNQKNEPLSE
EKDYKIAEIAEMEGADRNLKIIGRVFRISNTRSFVNRAGKEGKVANVLLADDTRKIRAVF
WTPNIKLLKKFKEGDIIQIKGFQVRGGFAGRKEIHLQPRATVKVLNPEDHPHIPEYKEEI
IPIAEIKEEDQEVNIIARITRISRIRTFERNGKEGKVASLELKDETGKITYTLWNRDTEL
IKDLPLKEGDAIKILGAQTRKREGEIYLTHHGLTRIIKGDFKVPQVEEKILKIGDLHEKR
DVTVIGLVTKVHDKINFERADGTTGSLRSLEIMDDTGTTRVTLWHDDADLDIKKGDIIKI
EGGNVEFDNYTSSHRINTNWNTRIIINPEEDTSLLKVLREYKEHLKPMKISSILEMEDEG
EEVDVVGRILSLEDPREFQREDSVGILRNMELADDTGVIRVTLWDEKATKSLNVGDAIKI
ENARVRLGLYDIELSVGKTSRIMKPLPEDIEELPSIQELEDFIYTKKKIDEIEEDDRKIK
VIGRVIDLYEPREFQRDDGVGILRIMELADDTGVIRVTLWDEKADIPLNIGDAVKIENPR
VRYRNENLELSIGRNSQIEVIKEEEIEDLPGFEEIEDMVYPSKSIGDLDEESKNVKISGE
LTDLYGDRIISYRCPRCNTRLEVSEENICNFCGESIDEPRYLLIIPGRISDDTGEIGITF
FGREAEKLLGMKTKEVVDIINKTGDEGALHDKVEDLNGAHITVIGNTNFDEYNEELRFNP
KKIVNIQF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaaatattagaggaatatgagaaggtgaaggataagatttcaaaggaagaa
ttcttaaagcggtttgaggaaataaaagaggaatatgatgtgggtttcatggatgatatt
gacatagcccgcatgatagtaggggaatatttaaaccagaaaaatgaaccattatcagaa
gaaaaagattataagatcgctgagatagctgaaatggaaggagctgacagaaaccttaaa
attataggtagagtattccgcatatccaacacaagaagtttcgttaaccgtgccgggaaa
gaagggaaagtagcgaatgtcctattagccgatgacaccaggaagataagagcagtattc
tggacacctaacataaaattactcaaaaaattcaaagaaggcgacataatccaaataaaa
ggcttccaagtaaggggaggattcgcaggcagaaaagaaatacacctacaaccccgcgcc
acagtaaaagtattaaacccagaagaccatccacacatcccagaatacaaggaagagatc
atacccatagcagagatcaaagaagaagaccaagaagtcaacatcatagcaaggataaca
cgcatatccaggataagaacattcgaaagaaatggtaaagaaggcaaagtagcatccctg
gaactaaaagatgaaacaggaaaaataacctacacactctggaacagggacacagaacta
ataaaagacctccccctaaaagaaggagacgccataaaaatattaggcgcccaaacaaga
aaaagagaaggagaaatatacctaacacaccatggccttacaaggatcataaaaggcgac
ttcaaagtcccacaggtggaagagaaaatattaaaaataggagacctccacgagaaaaga
gacgtgaccgtaatcggcctagttacaaaagtccatgataaaataaactttgaaagagcc
gacgggacaacaggctccctaagatccctcgaaataatggatgacacaggaactactaga
gtaacactatggcacgatgacgcagacctagacataaaaaaaggcgacataataaaaata
gaaggcggaaacgttgaatttgacaattacacctcatcccatcgcataaacaccaactgg
aacaccaggataataataaacccagaagaagacacaagcctcctaaaagtcctcagagaa
tacaaggaacatttaaaacccatgaaaatatcctcaatactagaaatggaggatgaaggc
gaagaagttgacgttgtcggccgcatattatcacttgaagaccccagagaattccagaga
gaagatagtgtcggtatactgagaaacatggaattagcagacgacaccggagttataagg
gtaacactatgggatgagaaggcaaccaaatcattaaacgtgggagatgctataaaaata
gagaatgctagagtccgcctaggcttatatgacatcgaattaagtgtgggtaaaacctct
aggataatgaaacccctaccagaagatatagaggaacttccaagcatacaagaacttgaa
gatttcatctacacaaagaaaaaaattgatgagatagaagaagatgacagaaaaataaaa
gttattggtagagtcatagacctttatgagcccagagaattccaaagggatgatggtgtt
ggtatactacggattatggagctggcagacgacaccggggttataagggtaacactatgg
gatgagaaggcagacatacccctcaacataggagatgctgtgaaaatagagaatcccagg
gtcagatatagaaacgagaaccttgaacttagtataggtcggaattcacaaattgaagtc
atcaaagaagaagaaatcgaagatttaccaggcttcgaggaaatagaggacatggtctac
ccatccaagagtataggagatcttgatgaggaatcaaagaatgtgaaaatttctggggag
ctaacagatctttatggtgacaggataatctcctacaggtgtcccaggtgtaatacacgc
ctagaagtcagcgaggaaaacatatgcaatttctgtggcgaatcaatagacgaaccacgc
tacctactcataatacccggcaggatcagtgatgacacaggggaaataggaataacattc
tttggaagggaagctgaaaaactactcggaatgaaaaccaaagaagtagtagatatcatt
aacaagacaggagacgaaggagctttacacgacaaagttgaagatcttaatggagcacat
ataactgtcattggaaatactaatttcgacgaatataatgaagaactaagattcaatccc
aaaaagattgttaatatccaattttaa
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