Methylophilus sp. TWE2: ACJ67_01880
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Entry
ACJ67_01880 CDS
T04002
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meu
Methylophilus sp. TWE2
Pathway
meu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACJ67_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meu03400
]
ACJ67_01880
Enzymes [BR:
meu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACJ67_01880
DNA repair and recombination proteins [BR:
meu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACJ67_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
P2_Phage_GpR
Motif
Other DBs
NCBI-ProteinID:
AKR42316
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All DBs
Position
complement(403597..404367)
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AA seq
256 aa
AA seq
DB search
MKLATWNVNSLTVRLPHVLDWLAANQPDVLCLQETKQEDSKFPYAALKEAGYHAVHNGQK
TYNGVAIISPHPIENVHLDLPDFADTQKRIIAATIQGVRVICAYVVNGQSVDSDKYQYKL
NWLGVLHAWVKEELRQHDKLALLGDYNIAPDDRDCHDPLAWQGQVLVSPPEREAFQQLLG
LGLHDSFRLFNEEAGQFSWWDYRMAAFRRNMGLRIDHILVSEALKPLCQSCIIDKAPRKL
ERPSDHTPVVLTLADA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactggctacctggaatgtcaattcactgactgtacgtttgccgcatgtattggac
tggctggctgccaatcagccagatgtcctttgcctgcaggaaaccaaacaggaagatagc
aagtttccgtatgcggcgctgaaagaagcaggttaccacgcagtgcataacgggcaaaaa
acctataacggggttgccatcatcagcccacacccaattgaaaatgtgcatctggaccta
cctgattttgccgacacgcaaaaaagaattattgctgcgacaatccagggtgtacgtgtg
atttgcgcttatgtggtcaacggacagtccgtagactctgacaaataccagtacaaactg
aattggttaggggtattgcatgcatgggtgaaagaagaactcaggcagcacgacaaactg
gcgttactgggcgactacaacattgccccagacgacagggactgccacgacccgctagcc
tggcaaggacaggtgctggtgagcccgccggagcgggaggcgtttcaacaactattggga
ttgggattacacgacagtttccggctatttaatgaagaagccggtcaattcagctggtgg
gattaccggatggcggctttccgccgcaacatgggcttgcgcatagaccatatccttgtc
agcgaagccttgaagcctttatgtcaaagctgcatcatagacaaggcaccccgcaaactg
gagcgtccaagtgaccacaccccagtggtgctgacactggctgatgcttaa
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