Methylophilus sp. TWE2: ACJ67_02300
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Entry
ACJ67_02300 CDS
T04002
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meu
Methylophilus sp. TWE2
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meu03032
]
ACJ67_02300
03400 DNA repair and recombination proteins [BR:
meu03400
]
ACJ67_02300
Enzymes [BR:
meu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACJ67_02300
DNA replication proteins [BR:
meu03032
]
Prokaryotic type
DNA Topoisomerases
ACJ67_02300
DNA repair and recombination proteins [BR:
meu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACJ67_02300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Toprim_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AKR42387
UniProt:
A0A0K0SSZ8
LinkDB
All DBs
Position
complement(498747..501317)
Genome browser
AA seq
856 aa
AA seq
DB search
MSKLLIVESPSKAKTLKKYLGGDFEVLASYGHVRDLIPKNGAVDPAQQFAMKYDIIDRNS
KHVDAIAKAVKNADSIYLATDPDREGEAISWHIAEILAEKKLIKNKLLKRVEFNEITQTA
VKHAIDHPRDISMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFTSQEYWSIHMSALKHAHGFDAKLIQLNGQKVEQFTVTNHDQQADIVGKLLLA
SAGKTTVTRVEKKQRSRSPAAPFTTSTLQQEAVRKLGFTTSRAMRVAQQLYEGMDVGSGT
VGLITYMRTDSFSLATEAVMQIRDYVKKHFDADYLPKAPIMYKTKAKNAQEAHEAIRPTD
ITRTPASVRQYLNDEQFKLYEMIWKRTLACQMTQAKYDAVSVDLSVGSEANLFRASGQTL
IFPGFIAVYMEGKDDDKDDEDAEAKLPHLETGEILTVEKIFGEQHFTEPPPRYSEASLVK
ALEEYGIGRPSTYASIISTLQDREYVLLDKKRFTPTDVGRVVNKFLTEHFTQYVDYDFTA
KLENELDEIAEGNLEWVPVMDKFWQGFNQQIQVKADVERPGNELIDEFCPKCGRQLQKQL
SRYGSFIGCTGYNATPKCDYKRNLDGEVNNASEPTVIGLDAETQKEIYLMNGPYGPYLQV
GQPVEGEKKKPKRVSIPKEIPLSQINIDTANMLLSLPRDLGQHPETGKKIVANIGRFGPY
VNHDGKFKSIPKTESVFSIDLEGAVKLLAAAGGPAPLADLGEHPSGEGRIEVFSGRFGPY
VQHNGIRATLPKSVTPEELTVEQALELLAEKAAKEGGKTAGKKTTAKKSAAKKPAAGKTT
ATKTAASKRAKKTATE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaactgctgatcgttgaatctccttccaaggccaaaaccctcaaaaaatatttg
ggcggtgattttgaggtcctggcttcttacgggcacgtgcgcgacctgatccccaaaaac
ggcgcggttgacccggcacagcaattcgcgatgaagtacgacatcatcgaccgcaatagc
aaacacgtcgatgccattgccaaagcggttaagaatgccgacagcatttacctggcaacc
gacccggaccgcgaaggggaagcgatttcctggcatattgccgagattctggccgagaaa
aaactgattaaaaacaagctgctcaaacgcgtcgaatttaacgagatcacgcagacggcg
gtaaaacatgccattgaccatccgcgcgacatctcgatggacctggtcaatgcgcagcaa
gcgcgccgcgcgctggattacctggtgggctttaatctttcgccgttgctgtggaaaaaa
atccgccgcgggctgtctgcgggccgcgtacaaagcccggccttacgcctgattgtcgag
cgagagctcgaaatcgaagcctttaccagccaggaatactggagcatccacatgagcgcg
ctcaagcatgcgcatgggttcgatgccaagctgatacagctcaatggccagaaagtagag
caattcacggtcaccaaccatgaccagcaggcagatatcgtcggtaagctgttactagcc
tctgccggtaaaacgacggtgacgcgtgttgagaaaaagcaacgcagccgcagcccggcc
gcaccattcaccacctccaccctgcaacaggaggccgtacgcaaactcggctttaccacc
agccgcgccatgcgggtggcacagcaactgtatgaaggcatggacgttggcagcggcacg
gtggggttgattacctatatgcgtaccgactcgttcagcctggccactgaagccgtgatg
caaatccgtgactacgtgaaaaagcactttgatgcagactacctgcccaaagcgcccatc
atgtacaaaactaaagccaaaaatgcgcaagaggcgcacgaggcgatccggcccactgac
attacacgtacacctgccagcgtgcgtcagtacctgaacgacgaacaattcaaattgtat
gaaatgatctggaagcgtaccttggcttgccagatgacacaggccaaatatgacgccgtc
agtgtcgacctgtcggtaggcagcgaggctaatctgtttcgcgccagtggtcagaccctg
attttcccgggctttattgccgtctatatggaaggcaaggacgacgacaaggatgacgaa
gacgcagaagcgaaattgccgcatctggaaactggtgagatactgacggtagagaagatt
ttcggtgaacagcactttaccgaaccaccgccgcggtattctgaagccagcctggtcaag
gcgctggaagaatatggcatcggtcgcccttcaacctatgccagtattatttctaccctg
caagaccgcgaatatgtattgctcgataaaaagcgctttacaccaactgatgtcggccgt
gtcgtcaataagttcctgaccgagcactttacccaatatgtcgactatgactttacggct
aagctcgagaacgagctggatgagattgcggaaggcaacctggaatgggtgccagtcatg
gacaaattctggcaaggctttaaccagcagattcaagtcaaagccgatgttgaacgtcct
ggcaatgaactgatcgacgagttctgcccaaaatgcggccgccagttgcagaaacagctt
agccgttatggcagctttatcggctgtaccggctataacgcgacacctaaatgcgattac
aaacgcaatctggatggtgaagtcaataacgcgagcgagcctaccgtcattggcctggat
gcagagacgcagaaggaaatctacctgatgaacggcccttatggtccatatctacaggtc
ggccaaccggttgaaggcgaaaagaaaaagcctaagcgcgtcagcattcccaaagagata
ccgctgagccagatcaatattgatacggcaaacatgctactgagtttgccgcgtgacctg
ggccaacaccctgaaacaggtaaaaaaattgtcgcaaatatcggccgcttcgggccttat
gtgaaccatgatggcaagtttaaatcgatcccaaaaaccgagagcgtcttcagcatagac
cttgaaggtgcagtcaaactgctggcagctgccggtggccctgccccactggcagacctg
ggtgaacacccatcaggcgaaggacggattgaggtattttcaggacgttttggcccctac
gtacaacataatggcattcgtgcaacgctgcctaagagcgtgacaccagaggagctgacg
gtagagcaggcgctggagctcctggccgagaaagccgctaaagagggtggtaaaactgct
ggcaaaaaaaccacagccaaaaagtcagcggccaagaaaccggctgcaggcaaaaccaca
gcgaccaaaaccgctgcaagcaaacgcgctaaaaagacagcaacagaataa
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