Methylophilus sp. TWE2: ACJ67_02730
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Entry
ACJ67_02730 CDS
T04002
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
meu
Methylophilus sp. TWE2
Pathway
meu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJ67_02730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meu03021
]
ACJ67_02730
03400 DNA repair and recombination proteins [BR:
meu03400
]
ACJ67_02730
Enzymes [BR:
meu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJ67_02730
Transcription machinery [BR:
meu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJ67_02730
DNA repair and recombination proteins [BR:
meu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJ67_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKR42464
LinkDB
All DBs
Position
564897..565883
Genome browser
AA seq
328 aa
AA seq
DB search
MQNNPTDYLKPRVVDVEVITPLRARVTLEPMERGFGYTLGNALRRVLLSSIPGFAITEVK
IDGVVHEYSTIEGVQEDVVDILLNLKGVALKLHNKTETILVLNKSGEGIVTAGDFEVGHD
AEIVNPNHIIANITKGGKLNLEVKVEMGRGYQPVPARQKANDEDRVLGFMMVDASFSPIN
KVSYHVESARVEQRTDLDKLIMDVETNGIIEPEQAIRDAARILIGQLSVFANLEGASADV
EVKAAPQVDPILLRPVDDLELTVRSANCLKAENIFYIGDLIQRTENELLKAPNLGRKSLN
EIKDVLASKGLTLGMKLENWPPVGLEKA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaccctacagattatttgaagccacgtgttgtggacgttgaagtgattact
ccactgcgtgcacgtgtgactttagagccaatggaacgtggctttggctataccttgggt
aatgcgttgagaagagttttgctctcttccattccgggttttgccatcactgaagtaaag
attgatggtgttgtacatgagtactccactatcgaaggtgtgcaagaagacgttgttgac
atcttgctcaacttgaaaggtgttgctttaaagcttcacaataaaactgaaaccattttg
gtgttgaacaaatctggtgaaggtattgtgactgctggtgattttgaagttggccacgat
gctgagattgttaacccaaaccacatcatcgctaacatcactaaaggcggtaagctaaat
ctggaagtgaaagttgaaatgggccgtggctaccagccagtcccagcccgtcagaaagcc
aacgatgaagatcgcgtgctgggtttcatgatggtcgatgcctctttcagcccaatcaac
aaagtgagctatcatgttgagagcgcacgtgttgagcagcgtactgacctcgacaaactg
attatggatgttgagactaacggcatcatcgagccagagcaggctattcgtgatgcagcg
cgtatcctcattggtcagctgtctgtgttcgcaaatctggaaggtgcttccgctgatgtt
gaggtgaaagcagctccacaggtagatcctatcctgttgcgtccagttgatgatctggaa
ctgacagtacgttctgccaactgcctcaaagcagaaaacattttctacattggtgatctg
attcagcgtacagaaaacgaattgctgaaagcgcctaacctgggtagaaaatcattgaat
gaaattaaagacgtgttggcctccaaaggcttgacactgggaatgaagctggaaaactgg
ccacctgttggcttggaaaaagcttaa
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