Methylophilus sp. TWE2: ACJ67_06730
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Entry
ACJ67_06730 CDS
T04002
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
meu
Methylophilus sp. TWE2
Pathway
meu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ67_06730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meu03019
]
ACJ67_06730
03009 Ribosome biogenesis [BR:
meu03009
]
ACJ67_06730
Enzymes [BR:
meu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACJ67_06730
Messenger RNA biogenesis [BR:
meu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACJ67_06730
Ribosome biogenesis [BR:
meu03009
]
Prokaryotic type
rRNA processing factors
ACJ67_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
zf-C2HC
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AKR43153
LinkDB
All DBs
Position
complement(1393399..1396089)
Genome browser
AA seq
896 aa
AA seq
DB search
MKRMLFNATQSEELRVAIVDGQKLIDLDIEHAGKEQRKSNIYKGVITRIEPSLEAAFVDY
GTDRHGFLPFKEIARSYFQDKPEQGRARIQDVIKEGQEVIVQVDKDERGSKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRVEGEERNELRDTMAQLEVPNGMSIIARTAGIGRNAEELQ
WDLNYLSQLWQAIEDASNFQPGAYLIYQESSLVIRAIRDYFSADIGEILIDTADVHEQAL
QFMNHVMPGNVTRVKLYQDEIPLFSRFQIEHQIESAFAREVRLPSGGAIVIDHTEALVSI
DVNSGRSIKGADIEQTAFNTNLEAAEEVARQMRLRDLGGLVVIDFIDMENQRNQREVENA
LRDALHHDRARVQMGKISRFGLLELSRQRLRPSLGETNHMTCPRCNGTGHIRGIESTALH
ILRITQEEAMKDNSAIIQVQLPVEAATFLLNEKRADIHKIEQRTGVEVILIPNIHMETPN
YNILRIRHDDVNEETTQASYKMVDLPSESDYQHRLQQAAAPSKIEALVKGITPATAAPIV
EEKPAVAPATEAKKSFFGVIKSWLGLEEKEVVQEVEKPARESRESGRDRNKNRNRRDRDR
QRERNQERGERPAKEENAHNKPRQERQAQEKPIQKDRQERQPAQETAKVDPNQPVLTSQA
NENKQERGERGNRRNRHGRRDRRQRDESTPATAESAVNTHAPVEAVIADAAPVVSPEMAA
VNTETAAKMEPATKAADPVVAQVSVAEAATESRDTSTAETTATPNEESATEKKAPRSRSR
TSKASKARGKTEAPAIELVETTSTATTVEATTETETPKKKPARKRKPAAKTAESVADAGI
QLVETKSEPVAAPSAVASGTETPTKAKKPRNAAKWKKDEAGNTADAGLVMVETQKE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttgtttaacgcaacgcaatcagaagaattgcgcgttgcgattgtcgat
ggacaaaaactcatagacctggatattgaacacgctggtaaggaacaacgtaaaagcaat
atctacaaaggcgtgatcacacgcatagaaccctctctcgaagccgcatttgtcgattat
ggtactgacagacacggctttttgccttttaaggaaatcgcccgcagctactttcaggac
aagcctgagcaaggtcgtgcccgtatccaggacgtcatcaaggaaggtcaggaagtcatt
gtccaagtagacaaggacgagcgtggcagcaaaggtgccgcgctgacgacttttatttca
ctggctggccgttacctggtattgatgcccaacaacccccgtggaggtggcgtttcccgt
cgcgtggaaggtgaagagcgtaacgagttgcgtgacaccatggcgcagttggaagtgcct
aacggtatgagcattattgcgcgtacggccggaattggccgtaacgcagaagaactgcaa
tgggacctgaactacctttcccaactatggcaagccattgaagatgcctccaacttccag
cctggtgcttacctgatttaccaggaaagcagcttggtgatccgcgccatccgcgattat
ttcagtgccgatattggcgaaatcctgattgatactgcagacgtacatgagcaagcctta
cagttcatgaaccacgtgatgccaggcaatgtgacccgcgttaaactctatcaggacgaa
atccctctgttctcccgcttccagatcgagcatcagatcgagtcagcgtttgcgcgtgaa
gtaagactgccttccggcggcgcgattgtgatcgaccacactgaggccctggtttcaatt
gacgtcaactctggccgctccatcaaaggggctgatattgaacagactgcgttcaacact
aacctcgaagcggctgaagaagtggcgcggcagatgcgcctgcgtgacctgggtggtctg
gtggtgattgactttattgacatggaaaaccagcgcaaccagcgtgaagtggaaaacgcc
ttgcgtgatgccctgcatcacgaccgcgcacgcgtccagatgggtaaaatttcccgtttt
ggtttgttagaattatcccgccaacgcctgcgccctagcctgggtgaaaccaaccacatg
acctgcccacgttgtaacggtaccggtcatatccgtggcattgaatccactgcattgcat
atcttgcgtattacgcaagaagaagcgatgaaagacaacagcgcgattatccaggtgcaa
ttgcctgtggaagcggccactttcctgcttaacgaaaaacgtgcagacattcataagatt
gagcagcgtacaggtgtggaagtcatcctgattcctaacatccacatggaaacgccaaat
tacaacatcctgcgtatccgtcatgatgatgtgaatgaagaaaccacccaggccagctac
aaaatggtggacctgcctagcgagtccgattaccagcaccgtttgcaacaggctgcggca
ccaagcaagattgaggctttggtgaaagggattactccagcgactgctgcaccgattgtg
gaggaaaaaccggctgtggcgcctgccactgaagccaaaaagtccttcttcggtgtaatc
aaatcctggttgggcctggaagaaaaagaagtggtgcaagaagttgaaaaaccagcgcgc
gaatccagggaatctggccgtgaccgcaacaaaaaccgcaaccgccgagaccgtgaccgc
cagcgtgaacgcaatcaagagcgtggtgagcgcccagccaaagaggaaaacgcgcacaac
aaaccacgtcaggaacgccaggcacaggaaaaacccattcaaaaagacagacaagagcgt
caaccagcgcaagaaactgcaaaagtagacccaaaccagcctgtattgacttcacaggcg
aacgaaaacaaacaagagcgtggtgaacgcggtaaccgccgcaaccgtcatggtcgccgt
gaccgtcgtcagcgtgacgaatccacgccagcgacagccgaaagcgcagtaaacactcat
gcgcctgtggaggcagtgatcgctgatgcagcgccagttgtctcacctgaaatggcagct
gtcaacacagaaacagcagctaaaatggaacctgcgactaaagccgctgacccagtggtt
gcgcaagtgtctgttgcagaggcagcaacagaaagccgtgacacaagcactgctgaaaca
actgcaacgccaaacgaagaaagtgcaactgagaaaaaagcgccgcgtagccgctcacgc
accagcaaagctagcaaggcgcgtggcaaaactgaagcgcctgcgatagaactggttgaa
acaacctctaccgccacgacagtggaagcaacgacagaaacagaaacacccaaaaagaaa
ccagctcgcaaacgtaaacctgccgcaaaaacagcagaaagcgttgccgatgcaggcatt
caattggtagaaaccaaatctgaacctgtcgcagccccatctgctgtagcctctggcacg
gaaacaccaaccaaggcaaaaaagccacgtaacgctgccaagtggaaaaaagacgaagca
ggtaatacagcagacgctggcctggtgatggtggaaacgcagaaagaataa
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