Methylophilus sp. TWE2: ACJ67_07330
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Entry
ACJ67_07330 CDS
T04002
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meu
Methylophilus sp. TWE2
Pathway
meu03030
DNA replication
meu03430
Mismatch repair
meu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJ67_07330 (dnaE)
03430 Mismatch repair
ACJ67_07330 (dnaE)
03440 Homologous recombination
ACJ67_07330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meu03032
]
ACJ67_07330 (dnaE)
03400 DNA repair and recombination proteins [BR:
meu03400
]
ACJ67_07330 (dnaE)
Enzymes [BR:
meu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJ67_07330 (dnaE)
DNA replication proteins [BR:
meu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJ67_07330 (dnaE)
DNA repair and recombination proteins [BR:
meu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJ67_07330 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKR43257
UniProt:
A0A0K0SVE9
LinkDB
All DBs
Position
1505508..1508987
Genome browser
AA seq
1159 aa
AA seq
DB search
MDAPEISTLQPAFIHLRCHSEYSIVDGTVRIDDYVKTAKNDAMPAIALTDLANLFGAVKF
YKAARGKGLKPVLGCDVWVENTVQRDQPHRMLLLVQDQQGYRNLCELLSKAYLENQYRER
AEIKVEWLVEQNAGLLMLSGFSAGDVGQALQAGNQSQAMQSARQWAKTFSGRYYLEVQRV
HDRDRPEAHTQEQLIQQTVLLAQQLDLPVVATHPVQFQTPDDFMAHEARTCIAEGYVLAD
NRRPRRFVESQYVKTQAEMQALFADMPVALQNSVEIAKRCNLMLTLGKNYLPDFPTPNGE
SLDAYLVDQSKAGLEHRLAYLYPDEQQREAKRAEYEERLQFECNIIVQMGFPGYFLIVAD
FINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLKYNLLFERFLNPERVSMPDFDIDF
CMEGRDRVIDYVKRKYGLASVSQIATFGTMAAKAVIRDVGRVLDLPFNFVDGIAKLIPME
LGITLESALEKEPQLQERREKEEEVAELLSLALRLEGLVRNIGMHAGGVLIAPGKISDFS
PVYCQPNGDSLVSQYDKDDVEAVGLVKFDFLGLRTLTILNMALENANAQRAQEELPPLSF
ETIPLDDKKSYHLLKTANTTAVFQLESRGMKDMLKQAKPDLFEDIIALVALYRPGPMDLI
PDFCRRKHGTQRVEYPHASTESILKETYGIAVYQEQVMQIAQVVAGYSLGGADLLRRAMG
KKKPEEMVKQREIFNEGALKNGLSLQQSNELFDLLEKFAGYGFNKSHAAAYALVAYHTAY
LKAHYPAAFLAATMSADMNNTDNVHTFFDDCGANHVEVLPPDINTSIYQFKPLNAQQVLY
GLGAIKGTGLAAIELIMASREAQGPFKDLFDFCQRLDLRKVNRRVIESLIRAGAFDKLEQ
NRAALLAGLDTAISVAEQGAAHAGQDCLFGGVIETRHELPAIPAWSPEQALQEEKTALGF
YLSGHPYLSYKAQLGPFIKGNLSELAPQDQPKLLAGVVMGVRVRMTQRGKMAIVTLDDAV
GRADVVIGAELLTQHAQWIKEDLLLVVEGRISHDEFSGGIRVSARKLYDLAAVRNRFAQM
LTISCNGSSDVHRLMTVLTPYRYAGEEQKRCPIKVDYHNQAAQVSLMLGDDWQVVLHDDL
LHNLQGWLSKENVKILYNA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacctgaaatttccaccttacaaccagcctttattcatctgcgctgtcacagt
gaatattccattgtggacggcacagtgcgtattgacgattacgtcaagaccgccaaaaac
gatgcaatgcctgccattgccctgactgaccttgccaacctgtttggcgccgtaaaattc
tacaaagccgctcggggcaaaggcctcaagcctgttctaggctgtgatgtgtgggttgaa
aatacggtgcagcgtgaccagccccaccgcatgttgttactggttcaggaccagcaaggc
taccgcaacttatgtgagttgctgtctaaggcgtacctggagaaccagtaccgtgagcgg
gcagaaatcaaggttgaatggctagtagagcaaaatgccggtttgttgatgctgtccggt
ttttcggcaggggatgtggggcaggcgttacaagcaggcaaccagtctcaagccatgcaa
tctgcccgccaatgggcgaagacttttagtggccgctattatctcgaagtgcaacgtgtc
cacgatagagatcgtcctgaggcgcatacgcaagagcaactcatacagcaaacagtattg
ctggcacaacaactggatttacccgtggttgctacacatcctgtgcaattccagacgccg
gatgacttcatggcacacgaggctcgtacctgtattgctgaaggatatgtgctggctgat
aaccgtcgcccgcgacgctttgtcgagtcgcaatatgtgaaaacacaagcagaaatgcag
gctttgtttgcggatatgcctgtcgcattacaaaactcggtggagattgccaagcgttgc
aacttgatgctgacactgggtaaaaactacctgccagatttcccgacgccaaatggcgaa
agcctggatgcctaccttgttgaccaatctaaagcagggttggagcatcgtttggcgtat
ttatacccggatgagcagcaacgggaagcaaagcgtgccgaatacgaagagcgcttacag
tttgagtgcaacatcatcgtacaaatgggctttcctggttactttctgatcgttgccgac
tttattaattgggccaaaaacaatggtgtgccagttggccctggccggggttccggtgct
ggttccctggtggcttacagtctagggattaccgacctcgatccgctcaaatacaacttg
ctgtttgagcgtttcctgaaccctgagcgggtgtccatgcctgacttcgatattgacttc
tgtatggagggacgagatcgggtcatcgattacgtcaagcgcaagtatggcttggcatcg
gtgtcacagatcgccaccttcggtaccatggcggccaaagcagtgatccgtgacgttggc
cgtgtgctggatctaccgtttaactttgttgatggtattgcgaagttgattccgatggag
ttgggcatcacgctagaatccgccctggaaaaagaaccacaactacaagagcgtcgcgaa
aaagaagaagaggtcgcagaattactttctctggcactacgtcttgaaggtttggtgcgc
aacattggtatgcacgccggtggcgtactgattgcgccaggcaagatttctgatttctcg
ccggtatattgccagcccaatggcgacagcctggttagtcagtacgataaagacgacgtg
gaggccgtaggtctggtcaagttcgacttccttggcttgcgtacgttaaccatcctcaat
atggcactggaaaacgccaatgcccagcgcgcgcaggaagaattaccgccactgagtttc
gagacgattccgctggatgacaaaaagagttaccacctgctgaaaacagccaataccacc
gcggtattccagctggaatcgcgcggcatgaaggacatgctcaagcaggccaagcctgac
ttgtttgaagatattattgcgctggtagcactgtatcgtccgggcccgatggacctgatt
cctgacttctgccgtcgtaaacatgggactcagcgggtcgaatacccgcatgcctcgacc
gagtctatccttaaagagacctatgggattgccgtgtatcaggaacaggtgatgcagatc
gcgcaggtagtggctggctatagcctgggtggtgcggacttgctgcgtcgcgccatgggt
aagaaaaaacccgaagaaatggttaagcagcgcgaaatctttaacgaaggtgcgctcaaa
aatggcctgagcttgcaacaatctaacgagctgtttgacttgttggaaaaatttgccggc
tatggctttaacaagtcgcacgcggctgcttatgccttggttgcttaccacacggcctac
ctcaaagcccattatcccgcggcgttcctggcggcgaccatgtctgccgatatgaacaac
accgacaacgtgcatactttctttgatgattgtggtgccaatcatgttgaagtgttgccg
cctgatatcaataccagcatttaccagttcaaaccactcaatgcgcagcaggtgctgtac
ggcttaggtgctatcaaaggcactggtctggcggcgatcgaactgattatggcttcgcgc
gaggcgcaaggcccctttaaggatttgtttgatttctgccagcggctcgacttgcgcaag
gtcaaccgccgagtcattgagtccttgatccgtgctggtgcgttcgacaaacttgaacag
aaccgcgccgccttgctggcgggcctggataccgcgatcagtgtggcagagcaaggcgca
gctcacgccgggcaggattgcttgtttggtggtgtgattgaaacgcgtcatgaattaccg
gccatcccggcatggagccctgaacaagccttgcaggaagagaaaacggcgctcggcttt
tacctcagtggtcatccatatttaagttacaaagcgcagttaggaccttttatcaaaggc
aacctcagcgaactcgctccgcaggatcagcctaaactgctggcaggcgtggtcatgggc
gtgcgcgttcgcatgacgcagcgcggaaaaatggcgatcgtgacgctggatgacgcggtt
ggccgtgctgatgtggtgattggcgcagaactgctgacacagcatgcgcaatggatcaaa
gaagacctgttgctggtggtagaggggcgtatcagccacgatgagttttctggcggcatc
cgtgtcagtgccagaaagctctatgacctggcggcggtcagaaaccgttttgcgcagatg
ctcaccatcagttgcaatggttcgtctgatgtccatcgcctcatgactgtgctcacacct
tatcgttatgccggtgaagaacaaaaacgttgcccgatcaaagtggactatcataaccag
gctgcgcaggtcagtctgatgcttggagatgactggcaagtcgtgttgcatgacgacctg
ctacataatttacaaggctggttgtcaaaagaaaacgtcaaaatcctttataatgcctga
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