Methylophilus sp. TWE2: ACJ67_13610
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Entry
ACJ67_13610 CDS
T04002
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
meu
Methylophilus sp. TWE2
Pathway
meu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ67_13610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meu03019
]
ACJ67_13610
03016 Transfer RNA biogenesis [BR:
meu03016
]
ACJ67_13610
Enzymes [BR:
meu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACJ67_13610
Messenger RNA biogenesis [BR:
meu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACJ67_13610
Transfer RNA biogenesis [BR:
meu03016
]
Prokaryotic type
tRNA degradation factors
ACJ67_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AKR44330
UniProt:
A0A0K0SYL7
LinkDB
All DBs
Position
complement(2886336..2888456)
Genome browser
AA seq
706 aa
AA seq
DB search
MFEITKKSLQLGAHTLTIETGEIARQADGAVMVSYGDTVVLVAATAKTEVKEGQDFFPLT
VDYQEKTYAAGRIPGGYFKREGRPSEKETLTARLIDRPMRPLFPDAFYNEVQIVATVLSL
DPEIDADIPAMIGASAAVALAGIPFYGPMGAVKVGYINGEYVLNPTATQLKESALDLVVA
ATETAVMMVESEAKELPEDVMLGAVVFGHEQMQPVIKMINELAAEAGKDAWDWTPPEPDT
ALIAKIEEIAAEDINAAFKIKSKGERSAKLDEIKSRVMSTLITEETSTLEANKIKDEFFK
LEAKTVRSQILNGEPRIDGRDTRTVRPITIRSGVLPRTHGSALFTRGETQALVVTTLGTG
KDEQIIDALAGEYYENFMLHYNMPPFATGETGRVGSPKRREIGHGNLAKRALKAVLPKKE
DFDYTLRVVSEITESNGSSSMASVCGGCLSMLDAGVPLTAHVAGVAMGLIKEGNRVAVLT
DILGDEDHLGDMDFKVAGTDKGVTALQMDIKITGITAQIMQVALAQAKEGRAHILGLMKQ
AVSGVNTEMSQFAPRIITMKINPDKIRDVIGKGGAVIQALTKETNTSIDIEDDGTVKIAC
TSAEEGAEAQRRIAQITAEVEVGQIYEGPVVKILDFGAVVTLMPGKDGLVHISQIAHERV
KAVSDYLKEGDIVKVKVVELDDKGKVRLSMKALIDPPAKEETPPAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaattacgaaaaaaagcctccagcttggggcgcataccctgaccattgaaacc
ggggaaatcgcacgccaggcagatggcgccgtcatggtgagctatggcgataccgtggtc
ctagtggctgcgactgcaaaaaccgaagtcaaagaaggtcaggatttctttccattgacc
gtggattaccaggaaaaaacctatgcggctggccgcattccaggcggttacttcaagcgt
gaaggccgtcctagcgaaaaagaaacgctgacagcccgtttgatcgaccgtccaatgcgt
ccgctgttcccagatgcgttctataacgaagtgcaaatcgtcgcgaccgtgttgtccctg
gatccggaaattgatgctgacatcccggccatgattggtgcttctgctgcggttgcgctg
gctggcatccctttctacggtccaatgggtgcggtaaaagtgggttacatcaatggtgaa
tacgtcttgaacccaacagcaacacaactgaaagagtccgcactggatttggtggttgct
gcgactgaaactgccgtgatgatggtggaatccgaagccaaagaattgccagaagacgtg
atgctgggtgctgttgtgttcggtcacgagcaaatgcaacctgtgatcaaaatgatcaac
gaactggctgctgaagccggtaaagatgcctgggactggacaccgccagagccagacact
gcgctgattgcaaaaattgaagagattgctgctgaagacatcaatgctgcattcaaaatc
aaatccaaaggcgagcgctctgccaagctggacgaaatcaagtcccgcgtcatgagcact
ttgatcactgaagaaacttctaccttagaagccaacaagattaaagacgagttctttaag
ctggaagccaaaaccgtgcgtagccagattctgaatggtgagccacggattgacggccgt
gatacacgcactgtgcgcccgatcactatccgttccggcgtattgccacgcacccacggc
tctgctttgttcactcgcggtgaaacgcaagcgctggtcgtgaccaccctgggcacaggc
aaagatgagcaaatcattgacgcgctggctggcgaatactacgaaaacttcatgctgcac
tacaacatgcctccgttcgccactggcgaaacaggccgtgtcggttcaccaaagcgccgc
gaaatcggccacggtaacctggctaaacgtgcattgaaagccgtattgcctaagaaagaa
gactttgactacaccctgcgtgtcgtgtccgagatcactgagtctaacggttccagctcc
atggcgtctgtctgtggtggctgcctctctatgctggacgccggtgtgccattgactgca
cacgtggctggtgtggcgatgggcttgattaaagaaggtaaccgtgtagcggtcctgact
gacatcttgggtgatgaagaccacctgggtgacatggactttaaagtggccggtaccgac
aaaggtgtgactgccctgcaaatggacatcaagatcactggtatcactgcacagatcatg
caagtggcactggcacaagccaaagaaggccgcgcgcacattctgggcctgatgaaacaa
gccgtgtctggcgtgaacaccgaaatgtcacagtttgctccacgtatcatcaccatgaag
atcaatccggacaaaatccgtgacgtgattggtaagggtggcgctgtgattcaggcactg
accaaagaaaccaacaccagcatcgacatcgaagatgacggtactgtgaaaatcgcctgt
accagtgcagaagaaggtgctgaggcacaacgccgtatcgcacagatcactgctgaggta
gaagttggccagatctacgaaggtccagtggtcaagattcttgactttggtgctgtggtg
actttgatgccaggcaaagatggcttggtacacatttcacaaatcgcccacgagcgtgta
aaagcagtgagtgattacctcaaagaaggtgacattgtgaaagtgaaagtggttgagttg
gatgacaaaggtaaagtgcgtttgagcatgaaagccctgatcgatccaccagcaaaagaa
gaaacaccaccggctgaataa
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