Methylomonas sp. UP202: QC632_02900
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Entry
QC632_02900 CDS
T10336
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
meup Methylomonas sp. UP202
Pathway
meup02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QC632_02900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
meup02022
]
QC632_02900
02035 Bacterial motility proteins [BR:
meup02035
]
QC632_02900
Two-component system [BR:
meup02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
QC632_02900
Bacterial motility proteins [BR:
meup02035
]
Pilus system
Twitching motility proteins
QC632_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
AAA_19
AAA_16
HTH_50
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WGS86716
LinkDB
All DBs
Position
655043..656383
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AA seq
446 aa
AA seq
DB search
MSPPVTLVVDDEPDIRELLEITLNRMDIQTRCAADLAGAKQLLASQRFDLCLTDMKLPDG
DGLELVDHIQACGLPLPVAVITAHGNMDIAIKAMKKGAFDFLSKPVDLAVLRQLVNHALQ
ASQGRAAEKERRTRDVLLGDSVPMRAIRSKIEKVARNQAPVYISGESGSGKELVARLIHQ
QSPRGAQPFVAINCGAIPLELMESEFFGHKKGSFTGAISDKQGLFQAAEGGTLFLDEVAD
LPLPLQVKLLRAIQEKKVRPVGEQREVPVDVRLLSATHKDLAKMVQEGAFRQDLYYRINV
IELNLPPLRAREADIPQLTRHLLTKLAAANGLAIPDLSDAAWRALKGYCFPGNVRELENI
LERALALHEGNLIDVDDLNLPLGLEAAAAEDFDAQKMSLESYLEGIEKKALSSALEENRW
NKTATAKQLGLTFRSLRYRLKKLGLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacccgtcacgctggttgtcgacgacgagcccgacattcgggaattgctggaa
atcacgttgaaccgaatggacattcaaacccgctgcgcggccgatttggccggcgccaag
caattgctggccagccaacgtttcgacttatgtttgaccgatatgaaattgccggacggc
gacggtttggaactggttgaccacatccaggcgtgcggtctgccattgccggtggcggtg
attaccgcgcacggcaatatggatatcgccatcaaggccatgaaaaaaggcgctttcgac
ttcctgtccaagccggtcgatttggcggtattgcggcagttggtcaaccatgcgttgcaa
gcctcgcaagggagggcggccgaaaaggaacgccgcacccgcgatgtcttgctgggcgat
tcggtgccgatgcgggcgatccgctcgaaaatcgagaaggtggcgcgcaatcaggcgccg
gtttatatcagtggcgagtccggctccggcaaggaattggtggcgcggttgattcatcag
caaagcccgcgcggcgcgcaaccctttgtcgcgatcaattgcggcgcgattccgctcgag
ttaatggaaagcgagttcttcggtcataaaaaaggcagctttaccggcgcgatcagcgac
aagcaaggtttgtttcaggctgccgaaggcggcacgttgtttctcgacgaagtcgccgat
ttgccgttaccgttgcaagtcaaattgttgcgagccatccaggaaaagaaagtccggccg
gtcggcgagcagcgcgaagtcccggttgacgtgcgcttattgagcgccacgcacaaggac
ttggcgaagatggtccaggaaggggcgtttcggcaggatttgtattaccggatcaatgtc
atcgaactgaatttgccgccgctgcgggccagggaagccgatattccgcaattgacccgg
catttgttgaccaaattggccgccgccaacggcctggcaattcccgatctgagcgatgcc
gcctggcgagcgctaaaggggtactgctttcccggcaatgtgcgggaattggaaaacatt
ctcgagcgagcgttggccttgcacgagggcaatctgatcgatgttgacgatttgaatttg
ccgttggggctggaggctgccgcggccgaggatttcgacgcgcaaaagatgtcgctcgaa
agctatttggagggcatcgaaaagaaagcgctgagcagtgcgttggaagaaaatcgttgg
aataaaaccgcgaccgccaagcaactgggcttgaccttccgctcgttgcggtatcggctg
aaaaagctgggactggagtga
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