Methylomonas sp. UP202: QC632_03575
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Entry
QC632_03575 CDS
T10336
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
meup Methylomonas sp. UP202
Pathway
meup03020
RNA polymerase
Brite
Enzymes [BR:
meup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QC632_03575 (rpoC)
Transcription machinery [BR:
meup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QC632_03575 (rpoC)
DNA repair and recombination proteins [BR:
meup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QC632_03575 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGS88460
LinkDB
All DBs
Position
816635..820834
Genome browser
AA seq
1399 aa
AA seq
DB search
MNFLKRQGRTEDFDAIRIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGP
ISDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIDLASPVAHIWFLKSLPSRI
ALLLDMTLRSIERVLYFETFVVTDPGMSPLEKGQLLTDEEYLNAMEEHGDDFVAKMGAEA
IYDLLKSIDLKDEINKLKEEINSTNSDTKIKKYSKRLKVIDSLLASNNRPEWMIMTVLPV
LPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLTRLLDLNAPDIIVRNEKRMLQEAVD
ALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLH
QCGLPKKMALELFKPFIFSKLQLRGLATTIKAAKKMVEREGAEVWDILEEVIREHPVLLN
RAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHIPLSIEAQLEARTLM
MATNNILSPANGEPVINPSQDVVLGLYYISREKVNAVGEGSIFTDLAEVMKALDAKTVEL
QTKVQVRITEKLKNADGEWESITSRKQTTVGRALIWEIAPDGMPYELINVDMTKKNISRL
INYSYRYLGIKETVILADQIMYLGFKYATRAGVSFGIEDMEIPAKKADIIRSAEAEVNEI
QNQYASGLVTDGERYNKVVDIWSRANDQVAKVMMEGLGEDEVVDAKGNNVKQKSFNSIFM
MAESGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGARKGLA
DTALKTANSGYLTRRLVDVAQDLVIAELDCGTQNGLTMTPIIEGGDVVEPLVDRVLGRVA
AVDVTDASGSKVLIPAGTMIDENLVTVLEENGVDKMLVRSVITCESRVGVCAKCYGRDLG
RGHLVNSGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRSAAVSNVQVKSSGTAKLNNLK
TVRNRENNLVAVSRSGEVGVMDDYGRERERYKIPYGAVLSVDDGGRVSAGDIIVNWDPHT
HPVITEVDGFIQLIDFIDGITVQEQSDEVTGLTSRVVTDPKQRSAAGKELRPMVRLIDEQ
GGQINLPGTDIPAQYFLPAGAIVGVKDGGEVKVGDVLARIPQESSKTRDITGGLPRVADL
FEARKTKDPAILAEATGMVSFGKETKGKQRVIITDAEGEQYETLIPKWRHITVFEGEFVE
KGETIAEGELTPHDILRLRGIEELSDYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKVE
ITASGETDFVKGEQVERVLVNIVNEQAEKEGKIPASYDSLLLGITKASLATESFISAASF
QETTRVLTDAAVRGISDSLNGLKENVIVGRLIPAGTGLAYHEQRRKKRHADLAGGMDSGM
SSVEVVDVEEALKQALNIE
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttaaaacgtcaaggtcgcaccgaagacttcgacgctatccgcattggtttg
gcttctcccgacatgattcgctcgtggtcgtatggcgaagtgaaaaagcccgaaacgatt
aattaccgcacatttaagcctgagcgtgatggtttgttttgcgccaaaatctttggtcct
atcagcgactacgaatgtttgtgcggtaaatacaagcgcttaaagcaccgcggtgtaatt
tgcgaaaagtgcggggtcgaagtaacgctatccaaggttcgtcgcgaacggatggggcac
atcgatctggccagcccggtcgctcacatttggttcttgaagtctctcccgtcgcgtatc
gcgttgctgctagacatgactctgcggtcgatcgagcgcgtgttgtatttcgagacattc
gtcgtcaccgatcccggtatgtcgccgttggaaaaaggtcagttgttgaccgacgaagag
tatttgaatgcgatggaagaacacggtgatgattttgtcgccaaaatgggcgccgaggca
atttatgatctgttgaaatccatcgacttgaaagatgaaatcaacaagttgaaggaagag
atcaattcgaccaactccgacaccaagattaaaaagtactctaaacggctgaaggtcatc
gattctctgctggcgtccaacaatcgtccggaatggatgattatgaccgtgctgccggtg
cttccgcccgaattgcgtccgctggtgccgttggacggtggccgtttcgcgacctccgac
ttgaacgatctgtaccgccgtgtcatcaaccgcaataaccgtttgactcggttattggac
ctgaacgccccggacatcattgttcgcaacgaaaaacgaatgctgcaagaagccgtcgat
gccttgctggataacggccgtcgcggccgggccattaccggtagcaaccggcgcccgctg
aaatcgctggccgatatgatcaagggcaagcaaggtcgtttccgccaaaatctgttgggc
aaacgggtcgactattcggggcgttcggtaatcgtggtcggtccaacgctgagattgcac
caatgcggtctgccgaaaaaaatggccttggagttgttcaagccgtttatattcagcaag
ctgcaactgcgcggattggcgaccacgattaaagccgctaaaaaaatggtcgagcgcgaa
ggcgctgaggtgtgggatatcctcgaagaggtcatccgtgagcatccggtgctactgaac
cgtgcgccaacgctgcatcgtttgggcatccaagcattcgagccgaccctaatcgaaggc
aaggcgatccaactgcacccgttggtgtgtagtgcgttcaacgccgacttcgacggcgac
caaatggcagtgcatattccgctgtcgatcgaggcgcagttagaagctcgtaccttaatg
atggcgaccaacaacatcttgtcgcccgcaaacggagagccggtgatcaacccgtcgcaa
gacgtggttttgggtctctattacatcagccgtgaaaaagtcaatgcggtcggagagggc
agcatattcaccgatttggccgaggttatgaaagccttggatgccaagacagtggagttg
caaaccaaggttcaggtcaggattactgaaaaacttaaaaacgctgacggtgagtgggaa
agcatcaccagtcgtaaacaaacaacggtggggcgtgccctgatctgggagattgctcct
gatggcatgccgtatgagctgatcaacgttgatatgaccaagaaaaacatttcgaggtta
atcaactatagctaccgctacttaggtataaaagaaacagtcattctagccgatcaaatc
atgtatttgggtttcaaatacgcaacgagagcgggtgtctcgttcggtatcgaagacatg
gaaattccggctaaaaaagccgatatcattcgttccgccgaggccgaggttaacgaaatc
cagaatcaatatgcgtcagggttagtgaccgacggcgagcgatacaacaaggtcgtcgat
atttggtcgcgggcaaacgatcaagttgcgaaagtgatgatggaaggcttgggtgaagac
gaagtggtcgacgccaaaggtaataacgtcaagcaaaaatcgtttaactcgatcttcatg
atggccgaatctggcgcgcggggttcagcggcgcagattcgccaattggcggggatgcgc
ggattgatggctaagccggacggttcgatcatcgaaacgccaattaccgcgaacttccgg
gaaggtctggacgtattgcagtatttcatctcgacgcacggtgctcgtaaaggtttggcg
gatacggcgttaaaaaccgctaactccggttatctaactcgacgtctggtagacgtggcg
caggatctggtgattgccgagctggattgtgggacccaaaacggtctgaccatgacgccg
atcatcgaaggcggcgatgtggtcgagccgctggtcgatcgggtattgggccgcgtggca
gcagtcgatgtgaccgacgcttccggttcaaaagtgttgatcccggcgggtacgatgatc
gatgagaacctggtgaccgttttagaagaaaacggcgttgataaaatgctggttcggtcg
gttattacttgcgaatctcgggtgggcgtttgcgccaaatgttacggccgcgatttggga
cgtgggcatctggtcaatagcggcgaggccattggtgtcgtcgcggctcaatcgatcggt
gagccgggtactcagttgacgatgaggaccttccatattggtggcgcggcctccaggtcg
gcggctgtcagcaatgttcaagttaaatccagcggtaccgcaaaactgaataacctgaag
accgttagaaaccgagaaaacaacttggtcgcggtatcccgttccggcgaagttggcgtg
atggacgattatggccgtgaaagagaacgctataagattccgtatggcgcggtactttcg
gtcgacgacggcggacgtgtcagtgccggtgacattatcgtcaactgggacccgcacact
catccagttatcaccgaagtggatggcttcattcagttgatcgattttatcgacggtatc
accgttcaagagcagtcggacgaagtcaccgggcttacatcgcgtgtggtaaccgatcct
aagcaacgaagtgcggccggtaaagagctgcgccccatggtacggttgatagacgaacaa
ggcggacaaattaacttacctggaaccgatattccggctcaatatttcttgcccgccggc
gcaattgtcggggttaaggatggtggtgaagtaaaggttggtgacgtattggcccggatt
ccgcaagaatccagtaaaacccgcgatatcaccggtggtttaccgcgggttgcggacttg
ttcgaagctagaaaaaccaaggatccggccattcttgccgaagctaccggtatggtgtct
ttcggtaaggagacgaagggtaagcagcgcgtcatcattaccgacgccgaaggggagcaa
tatgaaacgctcattccaaaatggcgtcatatcacggtgttcgaaggtgagtttgtagaa
aaaggcgaaacgattgccgaaggggaattgacgccgcacgatattctgcgtctgagaggt
atcgaggagctgtctgattatctggttaaggaaattcaggatgtttaccgtctacagggt
gtaaaaataaacgacaaacatatcgaagccatcatccggcaaatgctccggaaagttgag
ataacagcttccggcgaaaccgattttgtgaaaggtgagcaggtagagcgcgtattggtc
aatattgttaacgaacaggcggaaaaagaagggaaaattcctgctagttatgactcattg
ttgttagggatcactaaggcatcgttggcgactgagtcgtttatatctgcggcctctttc
caagagaccacaagagtgttgaccgacgctgcagtgcgaggcatcagcgatagtctgaac
ggcctaaaagagaatgtcattgttggtcgtttaatcccggccggtacaggtctggcctat
cacgaacaaaggcggaaaaaacgacatgccgacttggcgggcgggatggattccggcatg
tcttcagtcgaagtggtcgatgtcgaggaagcgctgaaacaggcgttgaatatagaataa
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