Methylomonas sp. UP202: QC632_03730
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Entry
QC632_03730 CDS
T10336
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
meup Methylomonas sp. UP202
Pathway
meup03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QC632_03730 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meup03021
]
QC632_03730 (rpoA)
03400 DNA repair and recombination proteins [BR:
meup03400
]
QC632_03730 (rpoA)
Enzymes [BR:
meup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QC632_03730 (rpoA)
Transcription machinery [BR:
meup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QC632_03730 (rpoA)
DNA repair and recombination proteins [BR:
meup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QC632_03730 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
WGS86872
LinkDB
All DBs
Position
837203..838213
Genome browser
AA seq
336 aa
AA seq
DB search
MQSSIGGLLKPRLVEVVNETANHSRIVIEPLERGFGHSLGNALRRVMLSSIPGCAVTEIS
IEGVLHEFTTLEGVQEDVIDIILNLKKLAVVVHSRDEVTLTLSKKGVGSVSAGDIDLPHN
VEIINPELVIANITQPECALNVKIKVERGRGYVPASVRKEQNEDAPVGVLMVDSSFSPIV
KVAYHVESTRVEQRTNLDRLVIELETNGTVDPEQAIKLAASILHDQLSVFVDFEKVNERV
EEEVVIEEETFDPILLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKK
SLTEIKDILAIKGLSLGMRLENWPPENLADQSQSGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttctattggcggccttttaaaacccagactagtcgaggttgttaacgaaacg
gccaaccactcaagaatcgttattgagcctttagagcgcggttttgggcattctttgggt
aacgcgttgcgccgtgtcatgttgtcgtctatacccggttgcgcggttaccgaaatctcg
atcgaaggcgttttgcacgagtttactacgctggaaggagttcaagaagacgtcatcgac
atcattttgaatttgaaaaagcttgcggtggtagtgcattctcgagacgaagtcacgttg
actctctccaagaaaggagtcggttctgtttcggctggcgacatcgatttgccccataat
gttgagatcataaatcctgagctggtgatcgccaatatcacgcaaccggaatgcgcgctg
aacgtcaaaattaaggttgagcgtggtcgcggttacgtacccgccagcgttagaaaggaa
caaaatgaagacgccccggttggcgttttgatggtcgactcgtcatttagcccgattgtt
aaggttgcataccacgtcgagagtacgcgtgttgagcagcgcacgaacctggatcggtta
gtaatcgaactggaaacgaacggcacagttgatccagagcaggctattaagttagctgct
tccattctccatgatcaattgtcggtttttgttgacttcgagaaagttaacgaaagggtg
gaagaagaagttgttatcgaagaagaaaccttcgaccctatcctattgcgtccagtagac
gatctggagttgaccgtaaggtctgcaaactgtttgaaggcagagaatattttctacatc
ggggatcttatacagcgcaccgaagttgagctattgcgcacccctaacttgggaaaaaaa
tcgcttaccgaaatcaaggatatcttggccattaaaggtctgtcgctaggtatgaggctt
gaaaactggccgccagagaatttggccgatcagtcacaatcaggcatttga
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