Methylomonas sp. UP202: QC632_03970
Help
Entry
QC632_03970 CDS
T10336
Name
(GenBank) RecQ family ATP-dependent DNA helicase
Organism
meup Methylomonas sp. UP202
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
DEAD
Helicase_C
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
DUF4194
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGS86916
LinkDB
All DBs
Position
894635..899947
Genome browser
AA seq
1770 aa
AA seq
DB search
MTFASHPLKPRCLCLDIETARQDRLQLREIGAVRPDTGAKLRISGKAKDLSARLDDISLG
AAFVLGHNVVAFDHPALALLNPGLALHRLPLVDTLELSPVAFPQNPYHRLVKDYKLCTTT
RNDPVRDAELAYELFLDQREALLQRVADHPDNMLCLHYLLAPESGRGVASFFATLRNALR
PSLDQAQAAWLKATTGKVCSNAQRRVAEDCFPDANWHKPLAYVLAWLRVAGGNSVLPPWV
GSQFPRTKILISQLRDVPCGDPACAWCSEQHDLKKLLARYFAGIPDFRATPTTADGRSLQ
QTIVEHGFAGRPMLAILPTGGGKSLCYQLPALARYYRSGSLTVVISPLQSLMKDQVDNLE
ARGITCAGFLNSLLNPLERRVVLDKLRLGDLGLIFVAPEQFRSSAFANALAHRDVGAWVF
DEAHCLSKWGHDFRPDYLYVSRFIKSRQKDKPSPVFCFTATAKPDVVADIVGHFKQRLDM
DLAVLSGGVSRDNLNYEVHAVPAQAKYPAVLSLLEAALRGDGGAIVFCARQKTVEEMAEF
LTQAGLDCGHFHGGMPPEHKRRMQEAFIAGELRVIAATNAFGMGVDKADVRLVIHLDTPG
SLENYLQEAGRAGRDQAPARCILLYDDADLDVQFRLLRNSRLTQQDIYAILKALRSIERK
DRSEGSVVVTSGEILLEIPDKHGIDPDAADADTKVRIAVAWLEEARLLERQENDTRVFPG
CLQVATLDEAGLLLKQKLGPNADPEPYLAVLAELLNAGDDEGISTDDLILATGQPAQVVQ
NLLRDLDRFKLVSNDTEIGVSFYRDPDTVERLADLVKLEDALVNCLREAAPDADLEQWQM
LHMRRLCDTLRRNAGVELEPDRLTRLLKAFAETFGDDGDKSRRGFFALRPGGPDHRYVKL
LRDWRQIEHIRAKRMRLAQALVGYFAELRQGNNLLVTCKQGVLEAALQSDLTLQDLEISD
WRRALAATLLYLDANEVLHLARGKAIFRSAMHIQLNPEARRRQFKNADYAELALHYKDKI
IQVHVMAEYAKLALGKIQAAMSFIVDYFGMERAEFVRRYFAGREDILEMATSEAAHRRIL
TDLKNPEQQAIVAAPPDANLLVLAGPGAGKTKVIVLRVAWLLREALVAPDAIMVLTYNRA
AAVEIRRRLWALAGADAAGVTVQTLHTVALRLTGTSCAVAAERGEAVDFGAVIKHAAANL
RRADENEEAGASARRDRLLAGLRYVLVDEYQDINADHYDLISALAGRTLSGADDKLTLMA
VGDDDQNIYAFNDANVRFIRQFKVDYQAKVCYLVENYRSTGQIIACANRVITGAKERMKR
EQLIRVDHFRRDQPAGGEFEALDPLTLGRVHILRTPPPAGAELAAALAELKRLNALRFGE
RPAHWGRFAVIARHWQALEPLAALCRSQEIPARLLRDDELPALHATREGAALLALLSGQS
RKSVRPEPVEGRLPKEGRRRESSSRRVLIRPGSLSRWFRRRYGQSVTEAISHPYRAMLAQ
FIADAEVSSTDNVPFISPLPGGRLQGSRSESNVRNGCREGPGVRGQGRLVAADLIEALYE
FGSGSQSRFADGPHAPLLLLTAHRAKGLEFDHVLILDAGGWQQAGDDERRLFYVAMTRAR
KTLTLCQRLGGRHAFIADCAPLCLTSSVEAVGDPPEARIRRWLAGPEHIVLSWPGYFAPG
HAIHRAIAALDYGAPLTLRPRNDGKPGWELADANGTTVSRMAQAFVPPQGTIISVRVAGI
LARQAKVGDLEGLRSERWEVVLAEVEYWVS
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgcttcccatcctcttaaaccccgctgtctgtgcctggacatcgaaaccgcc
cgccaggaccgattgcaactacgcgaaatcggcgccgtccgcccggataccggcgcgaaa
ctgcgcatttccggcaaggctaaggacttgagcgcgcggctggacgacatcagtctaggc
gcggcgtttgtgttggggcacaacgtcgtcgccttcgaccatccggccttggcgctgctg
aatccggggctggctttgcatcgattgccgctggtcgataccctggagttatcgccggta
gcctttccgcaaaatccttatcaccgtctggtcaaagattacaaactctgcacgacgacc
cgcaacgatccggtgcgcgacgccgagctggcttacgaattgtttttggatcaacgtgaa
gctctgttgcaaagggtcgccgatcatcccgacaacatgctctgcctacattatttgttg
gcgccggaaagcgggcgcggcgtcgccagtttcttcgcaaccttgcgcaacgcgctaagg
ccaagtctggatcaagcccaggcggcttggttgaaagcgaccaccggcaaggtttgcagc
aacgcccaacgccgcgtcgccgaagattgtttccccgatgcgaattggcacaagccgctg
gcctacgtgctggcctggctgcgggtggccggtggcaattcggtattgccgccctgggtc
ggcagccagtttcctcgaaccaaaatcctgattagccaactgcgcgacgtgccctgcggc
gatccggcttgcgcttggtgcagcgaacagcacgacttgaaaaaactgctggcgcgctac
ttcgccggcatcccggattttcgcgccacgccgaccaccgccgacggccgctccttgcag
caaaccatcgtcgaacacggtttcgccggtcggccgatgctggcgattttgccgaccggc
ggaggcaagtccttgtgttaccagttgccggccctggcccgctattaccggagcggcagc
ctgaccgtagtgatttcgccgctgcaatcgttgatgaaggaccaggtcgacaatctggaa
gcgcgcggcatcacctgcgccggcttcttgaacagcctgctcaacccgttggagcggcgg
gtcgtgctcgacaaactgcgcttgggcgatttgggattgatcttcgtcgcccccgagcaa
ttccgcagcagcgcctttgccaacgccctggctcaccgcgatgtcggcgcctgggtgttc
gacgaggcgcattgtctgtccaaatgggggcacgacttccgcccggattatctgtacgtg
tcgcgcttcatcaaatcgcggcagaaggataaaccgtcgccggtattctgctttaccgcc
accgccaagcccgacgtggtcgccgacatcgtcggccatttcaagcagcggctggacatg
gacttggcggtgctgagcggcggggtcagtcgcgacaacttgaactacgaagtccacgcg
gtgccggcccaggccaaatacccggcggtgttgagtttgctggaagcagccttgcgcggc
gacggcggcgccatcgtgttttgcgcccggcagaaaaccgtcgaggaaatggccgagttt
ttgactcaggccggcctggactgcggccacttccacggcggcatgccgcccgaacacaag
cggcggatgcaggaagccttcatcgccggcgagttgcgggtcatcgccgcgaccaatgct
tttgggatgggcgtggacaaggccgacgtgcggctggtgattcatctcgatacccccggc
tcgctggaaaattatttgcaggaagccggccgcgccggccgcgatcaggcgccggcgcgc
tgcatcttgctgtacgacgacgccgacctggacgtgcagtttcgcttgttgcgtaattcc
aggctgactcagcaggacatttacgcgattctcaaagccctgcgcagcatcgaacgtaag
gacaggagcgagggcagcgtagtcgtcaccagcggcgaaatccttttagaaatccccgac
aagcatggcatcgaccccgacgccgccgatgccgacaccaaggtgcgcatcgccgtggcc
tggctggaagaggcgcggttgctggagcgccaggaaaacgatacacgggtgtttccaggc
tgtttgcaagtcgcgacgctggacgaagccggattattgttgaagcaaaagctagggccc
aacgccgatcccgaaccttatctggccgtgctcgcggaattgctcaacgccggcgacgac
gaaggcatcagcaccgacgacctgatattggccaccggccagccggcgcaggtggtgcaa
aacctgctccgcgatttggatcgcttcaagctggtgtccaacgacactgaaatcggcgtg
agcttttaccgcgacccggacaccgtcgaacgcctggcggacctcgtcaaactggaggac
gcgctagtcaactgtctgcgcgaagccgcgccggatgcagatctggaacaatggcagatg
ctgcacatgcgccgcttgtgcgacaccttgcgccgcaatgccggcgtcgaattggaaccg
gaccgtttgacccgcttgctgaaagcctttgccgaaactttcggcgacgacggcgacaaa
tcccggcgcggcttttttgcgttgcgccccggcggcccggaccaccgctacgtcaagctg
ttgcgtgactggcggcaaatcgagcacatccgcgccaagcgcatgcgactggcccaggcc
ctggtcggctatttcgccgaactgcgccagggcaacaacttgttggtgacctgcaagcag
ggcgtgttggaagcggctttgcaaagcgatttgaccctgcaggacctggaaatcagcgac
tggcgacgggcgctggccgccacgttgctgtatctggacgccaacgaggtcttgcacttg
gcgcgcggcaaggcgattttccgttcggcgatgcatattcaactgaatcccgaggcgcgc
cgccgccagtttaagaatgccgattacgccgagctggctttgcattacaaggacaagatc
atccaggtgcacgtgatggccgaatacgccaagctggcgctgggcaagatccaggcggcg
atgagtttcatcgtcgattactttggtatggaacgggccgaattcgtgcgccgctatttc
gccggccgcgaggacatcctggaaatggcaaccagcgaggccgcccaccgccgcatcctc
accgacctgaagaaccccgagcagcaagccatcgtcgccgcgccgccggacgccaatttg
ctggtattggccggacccggcgccggcaagaccaaggttatcgtcctccgggtggcctgg
ctgttgcgcgaagccctggtcgcgccggatgcgatcatggtgctgacttacaaccgggcg
gcggcggtcgagattcgccgcaggctgtgggccttggccggcgccgatgccgccggcgtt
accgtgcagaccttgcacacggtggcgctaaggctgaccggcaccagttgcgcggtggca
gccgagcgcggcgaagccgtggattttggcgcggtgatcaaacatgccgccgccaacttg
cgccgcgccgatgaaaatgaagaagccggcgcctcggcgcgccgcgaccgcttgctggcc
gggctgcgttacgtgttggttgacgagtaccaggacatcaacgccgaccattacgacttg
atcagtgctcttgccggccgaaccttgagcggtgccgacgataaattgaccttgatggcg
gtcggcgacgacgatcaaaacatctacgccttcaacgacgccaacgtgcgtttcatccgc
cagttcaaagtcgattatcaggccaaggtgtgttacctggtggaaaattaccgctccacc
gggcagatcatcgcctgcgccaaccgcgtcataactggcgccaaggaacgcatgaagcgc
gagcagcttatccgcgtcgaccacttccgccgcgaccagccggccggtggcgaattcgag
gcgctggacccgttgaccttgggccgggtgcatatcctgcgaacacctccgccagccggc
gcggaactggcggcagcgttggccgaattgaaacgcttgaacgccttgcgttttggcgaa
cggcctgctcattggggccgcttcgcggtcatcgcccgccattggcaagccctggagccc
ttggccgcgctgtgccgcagtcaggagattccggctaggttattgcgcgacgacgaattg
ccggctttgcatgcgacgcgcgaaggggcggcgttgttggctttgctgtcgggtcagtcc
cggaaatccgttcgccctgagccagtcgaagggcgcttgccaaaagagggacgccgccgg
gagagcagtagccggcgcgtattgatacgcccgggctccctatcccgctggtttcgccgc
cgctacggccagtcggttaccgaggctatcagccatccctaccgggcgatgttggcacaa
ttcatcgcagacgccgaagtcagttctacagacaacgtgcctttcatctcccctctccct
gggggacgactgcaaggaagcaggagtgagagcaacgtccggaacggttgccgggaggga
ccgggggtgagggggcagggccgcttagtcgccgccgacctgatcgaagccctctacgaa
ttcggcagcggcagccaatcccgcttcgccgacggcccgcacgcgccgctgttgctgctg
accgcccaccgcgccaagggcctggaattcgatcacgtgctgattcttgatgccggcggc
tggcaacaagccggcgacgacgaacgccgcctgttctacgtagcaatgacccgcgctcgc
aagaccttgaccttgtgccaaagactaggcggccgccacgccttcatcgccgactgcgcg
ccgctgtgcctgaccagcagcgtcgaagcggtcggcgacccgccggaagcccgcatacgc
cgttggctggctggaccggaacacatcgtcctgtcctggcccggctactttgcacccggc
cacgctatccaccgcgccatcgccgcgctcgactacggcgccccgttgaccctgcgaccg
cgcaacgacggcaaacccggctgggaactcgccgacgccaacggcaccaccgtcagtcgc
atggcgcaagcctttgttccgccgcaaggcactatcatctcggttcgcgtcgccggtatt
ttggctcggcaggccaaggtaggagatttggagggattacggagcgagcggtgggaggtg
gtgttggctgaggtggaatattgggttagttga
DBGET
integrated database retrieval system
