Methylomonas sp. UP202: QC632_04895
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Entry
QC632_04895 CDS
T10336
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
meup Methylomonas sp. UP202
Pathway
meup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC632_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meup03019
]
QC632_04895
Enzymes [BR:
meup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC632_04895
Messenger RNA biogenesis [BR:
meup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QC632_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Protoglobin
CMS1
Motif
Other DBs
NCBI-ProteinID:
WGS87091
LinkDB
All DBs
Position
1110316..1111605
Genome browser
AA seq
429 aa
AA seq
DB search
MLFSELGLSEQILRAVAEQGYETPTPIQEQAIPVILQGRDVLAGAQTGTGKTAGFTLPLL
QLLQQAPVRKKPRPIRVLILTPTRELALQVYESVCSYGKHLPFFAEAIFGGVSSKPQIQK
LQRGTDIVVATPGRLLDLIQQGYADLSQIEYFVLDEADRMLDMGFIRDIRKIIQLLPARR
QNLLFSATYSPEISTLAEQLLSDPVEIAVAKRNSAAETVSQLVYGIKRESKRELLAHLIG
DGRWQQVLVFVRTKHGADRLCKQLIKDGIRCAALHGDKSQGARTRALDDFKSGAITALVA
TDIAARGLDIDQLPHVVNYDLPQVAEDYVHRIGRTGRAGAEGQAISLVDAEEAQLLAAIE
KLLKKSIPRVADTGYEKVSLEPVSAKSQPKAKPKAAAKPRSQARPGDRAGERARGGRPPR
AAAGGARGR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctattttcagaactcggtctttccgagcaaattcttagagccgttgccgaacaaggt
tacgaaacgcctactccgattcaggagcaagcgatcccggtgatattgcaggggcgggat
gtgctggccggtgctcaaaccggcaccggcaaaaccgcgggctttacactgcctttgttg
caattgctgcaacaagcgcctgtgaggaaaaagccccgacctattcgggtgttgatccta
acgccgacccgcgaactggcgctgcaggtctacgagagcgtttgctcttacggtaagcat
ctgccgttttttgcggaagcgattttcgggggcgtcagcagcaagccgcaaatccaaaaa
ttgcagcggggaaccgatatcgtggttgcgactcccggccgcttgttggatttgatccag
caaggctatgcggacctgtcgcaaatcgagtatttcgtgctcgacgaagccgaccggatg
ctggatatggggtttatccgcgacatccgcaaaattatccaattattgccggcacggcgc
cagaatctgttgttttcggcaacgtattcgccggagatcagcacgctggccgaacaattg
ttgagcgacccggtcgagattgccgtcgccaaacgcaattcggcggcggaaaccgtgtcg
cagttggtttacggtatcaagcgcgagtccaagcgcgaattgctggcgcatctgatcggc
gacggccggtggcagcaggtgctggttttcgtgcgtaccaagcacggcgcggatcgcttg
tgcaagcagctgatcaaggatggcatacgctgcgcggccttgcacggcgacaagagccag
ggagccaggacccgcgcgctggacgattttaaaagcggtgcgatcacggcactggtggcg
accgacatcgccgcacgcgggcttgatatcgaccagttgccgcatgttgtcaattacgat
ctaccgcaagtcgccgaggactatgtgcatcgcatcggacgcaccggccgggccggcgcg
gaagggcaggcaatctcgttggtcgatgctgaagaagcgcaattgttggcggcaatcgaa
aaactcctgaaaaagtcgattccgcgcgttgccgatacaggctacgaaaaagtgtcgctg
gaaccggtttccgccaagtctcagcccaaggccaagcctaaggcagcggctaaacctcgg
tcgcaagctcggcccggcgaccgtgcgggcgaacgtgctcggggcggccggccgcctcga
gccgctgccggtggcgcgcgcgggcgatga
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