Methylomonas sp. UP202: QC632_05000
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Entry
QC632_05000 CDS
T10336
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
meup Methylomonas sp. UP202
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meup03016
]
QC632_05000 (truD)
Enzymes [BR:
meup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QC632_05000 (truD)
Transfer RNA biogenesis [BR:
meup03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QC632_05000 (truD)
Prokaryotic type
QC632_05000 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WGS87110
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All DBs
Position
1128888..1129937
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AA seq
349 aa
AA seq
DB search
MSEFPLPDWPRAFGGPSGTGDIKIIPEDFFVEEILGFQPEGSGEHVFLFVEKIGENTEYV
ARLLARHACVRQRDIGYAGLKDRHGRTRQWFSVWLPGKVEPDWRMLQGDHLKILEAVRHP
RKLKRGVLQGNRFEILIRNWQGDRERLDAQLEQVKRLGFPNYFGEQRFGFQGRNVGRAAA
MFGGVRVKAEQRSIYLSAARSYLFNLILAERVATGSWSTGLTGEAFMLAGSHSYFAADEI
DSALAARLAAGDIQCSGALWGKGVSGARADALELEQRIVAAQPILAQGLISAGLTKDRRA
LVVRPTDLVWGFESEAVLRLGFGLPAGAYATALLREIVALDEPLGVVAT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatttccgttaccggactggcctcgcgctttcggcggcccatccggcactggt
gacattaaaatcatccccgaggatttctttgtcgaagaaattctcggcttccaaccggaa
ggcagtggtgagcacgtgtttctattcgtcgaaaaaatcggcgaaaacaccgaatacgtc
gcccgtttgttggctcgccacgcctgcgtcagacagcgcgacatcggttacgccggcctg
aaagaccgccatggccgcacccggcagtggttcagcgtttggttgcccggcaaggtggag
cctgattggagaatgttgcagggcgaccatctgaaaatactggaagcggttcgccaccca
cgcaagttaaagcgcggtgtgctacagggcaatcgcttcgaaattttgatccgtaactgg
caaggcgaccgcgaacgcttggacgctcaactcgagcaagtcaagcgcttggggtttccc
aactatttcggcgaacagcgctttggttttcaaggccgcaatgtcgggcgcgcggcggcc
atgttcggcggtgttagggtgaaagctgagcagcgctcgatttacctgtcggcggcgcgg
tcttatttatttaatctgattctggccgaacgggtggcgaccggtagctggagcaccggc
ctgactggcgaggcttttatgctggccggcagtcacagctattttgccgcggatgaaatc
gattcggcgctggcggcgcgactggcggccggcgacattcagtgcagcggtgcgttgtgg
ggcaagggcgttagtggggctcgcgccgatgcgctggaactagagcaacgaattgtcgcg
gcgcagccgatactggcgcaaggtttgatttcggctggcctgacgaaggataggcgagcg
ctcgtggttaggccgaccgatttggtgtggggcttcgagagtgaagcggttttgcgctta
ggtttcggtttgccggccggcgcttacgcgacggcgctgttgcgggaaattgtcgcgctt
gacgagccgttaggcgtggtcgcgacctag
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