Methylomonas sp. UP202: QC632_09550
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Entry
QC632_09550 CDS
T10336
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
meup Methylomonas sp. UP202
Pathway
meup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC632_09550 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meup03019
]
QC632_09550 (pnp)
03016 Transfer RNA biogenesis [BR:
meup03016
]
QC632_09550 (pnp)
Enzymes [BR:
meup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QC632_09550 (pnp)
Messenger RNA biogenesis [BR:
meup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QC632_09550 (pnp)
Transfer RNA biogenesis [BR:
meup03016
]
Prokaryotic type
tRNA degradation factors
QC632_09550 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
DUF6160
S1_2
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WGS87986
LinkDB
All DBs
Position
2197537..2199615
Genome browser
AA seq
692 aa
AA seq
DB search
MNPIRKQFQYGDRLVTLETGEIARQANGAVIIDVEGTTLLVTVVGKKESSGGDFFPLTVD
YQEKAFAAGKIPGGFFKREGRPSENETLISRLIDRPIRPLFPEGFTNEVQIIATVLSLNP
EIDTEAPAIIGASAALAVSGLPFNGPLGAATIGYIDGQYVLNPTLPQLKESRLRLMVAGT
QKAVLMVESEADLLPEDVMLGAVLFGHEQMQVAINAINELAAEVATPALNWAAPADNEAL
KAAVAAEAEAQIKAAYQIPEKLVRQDALSAIRAAVVEKLTAEALFAEKDIRDVIETLEYN
VVRGAILNDRTRIDGRDLTTVRPITIRTSVLPRTHGSALFTRGETQALVVATLGTERDAQ
IIDALAGEYKDTFLFHYNFPPFSVGETGRTGSPKRREIGHGRLAKRGVQAVTPTIGEFPY
VIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLIKEGDQFAVLSDILG
DEDHLGDMDFKVAGSETGITALQMDIKIDGITPEIMKVALDQAKQGRLHILGEMNKALST
SRTQMSDFAPRIITFKIDPSKIREVIGKGGVTIRAITEQTGASVDLTDDGTVNIASVDKA
AGEEAKRMIEEITAEVEVGKTYEGKVVRLMDFGAFVTILPGKDGLVHISQISEERVEKVS
DKLSEGDVVKVKVLEIDRQGRVRLSMKEVDNA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcaggaaacaatttcagtacggggatcgtctcgtcacgctagaaaccggc
gaaatcgcccgccaagccaacggcgcggtgatcattgatgtagagggcaccaccctgctg
gtgactgtggtcggtaaaaaggaaagtagcggcggcgacttttttccattgacggtggac
taccaagagaaagcctttgccgcgggcaaaattcccggcggctttttcaaacgcgaaggc
cgtcccagcgaaaacgaaaccctgatctctcgcttgatcgatcgaccgattcgcccattg
tttcccgaaggctttactaacgaagtacaaatcatcgcgacggtattgtcgttgaacccg
gagatagacaccgaagcgccggccattatcggcgcatccgccgcgttggcggtttcgggc
ctgccgttcaacggcccgctgggcgccgcgaccattggttatatcgacggtcaatatgtg
ttgaacccgaccttgccgcaactgaaggaatcgcgcttgcgtctgatggtcgccggcacc
caaaaagccgtgttgatggtggaatcggaagccgatttgctgccggaagacgtgatgctg
ggcgcggtattgttcggtcatgagcaaatgcaggtcgcgatcaatgcgatcaacgaactg
gccgccgaagtcgctacgcctgccctgaactgggcggcgcccgccgacaacgaggccttg
aaagccgccgttgccgccgaagccgaagcgcaaatcaaagccgcctaccaaattcccgag
aaactggtcagacaagacgccttgagtgcgatccgcgcggccgtcgtcgaaaaattgacc
gccgaagctctgtttgccgaaaaagacatacgcgacgttatcgagaccttggaatacaac
gtcgttcgtggtgcgattctgaacgaccgcacccgtatcgacggccgcgatttgaccacg
gtcagaccgatcacaattcgtaccagcgtattgccgagaacccacggttcggcactgttc
acccgcggcgaaactcaagccttggttgtcgcgaccctgggtaccgaacgcgacgcgcaa
atcatcgacgcactggcgggcgaatacaaggacaccttcctgttccactacaactttccg
ccgtttagcgttggcgagaccggccgcaccggttctcccaaacgccgcgaaatcggtcac
ggccgcctggccaagcgcggcgtgcaagccgtgacgcccacgatcggcgaattcccctac
gtgattcgcgtcgtttcggaaatcaccgaatcgaacggctccagctcgatggcgtcggtg
tgcggcagcagcttggcgctgatggatgccggtgtaccgttgaaagcgccggtcgccggc
atcgcgatgggtttgatcaaggaaggcgatcaattcgccgtgttgtcggatattctgggc
gacgaagatcatttgggcgacatggactttaaagtggccggttccgaaaccggtattacc
gcgctgcaaatggacatcaagatcgacggcattaccccggaaatcatgaaagtcgcgctg
gaccaagccaagcaaggccgcctgcacatattgggcgaaatgaacaaagccttgtccaca
tcgcgcacccaaatgtcggacttcgcgccacgcatcatcaccttcaagatcgatccgtcc
aaaatccgcgaggtgatcggtaagggcggcgtgacgatacgggcgatcaccgagcaaacc
ggcgctagcgtcgatttgaccgacgacggtaccgtgaatatcgcttcggtcgataaagcc
gctggtgaagaagccaaacgcatgatcgaggaaatcaccgccgaggttgaagtcggtaag
acttacgaaggtaaagtcgttcggttgatggatttcggcgcattcgtgacgatactgccc
ggtaaggatggcttggtacacatctcgcaaatttcggaagaacgtgtcgaaaaagtcagc
gacaaattgtcggaaggcgatgtggtaaaagtcaaagtgctggaaatcgaccgccaaggc
cgggtgcgtttgagcatgaaagaagtcgataacgcttga
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