Methylomonas sp. UP202: QC632_11550
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Entry
QC632_11550 CDS
T10336
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
meup Methylomonas sp. UP202
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meup03009
]
QC632_11550 (dbpA)
Enzymes [BR:
meup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC632_11550 (dbpA)
Ribosome biogenesis [BR:
meup03009
]
Prokaryotic type
rRNA helicases
QC632_11550 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
AAA_30
Helicase_RecD
DUF3549
CMS1
NOMO_3rd
B12-binding
AA_kinase
Motif
Other DBs
NCBI-ProteinID:
WGS88369
LinkDB
All DBs
Position
2648235..2649620
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AA seq
461 aa
AA seq
DB search
MNTPEFCSLSLKPALLENIESLGYTRMTAIQAETLPHILENKDVIAQAKTGSGKTAAFGI
GLLSRLDSNSFKVQAMVICPTRELADQVCKEIRQLARLTQNIKVLVLCGGAPFTSQRASL
EHGAHVVVGTPGRLWEHLQKHSLRLEHLKVLVLDEADRMLDMGFADIITDVISHAPSHRQ
TLLFSATYSEAVRALSQRFQFRPVSVSVEVSHRDNDIEQRFHRIDKNKRLNALGYMLAYH
RPESTVVFCNTKRECQDVADTLAHCGFSVQALHGDLEQKDRDQVLVRFANKSCSILVATD
VAARGLDIKDIQAVINYELPFDPEVYVHRIGRTGRAGAKGLALSLVGDAELNRVKAIEDY
MNVGARWDEVAPFRLDREERYEPPMVTLWIDGGRKDKMRPGDILGALTGAGGVAGGEVGK
IDVFDKQAYVAIKRDRADMALACLRKGKIKGHRFNVRLSQW
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacacctgaattttgttccctgtcgttaaagccggctctgctggaaaacatcgaa
tccctgggttatacccgcatgacagccatccaggccgaaactctaccgcatatacttgaa
aacaaggacgtcatcgcccaggcaaaaacaggtagcggcaagaccgccgcgttcggcatt
ggcttgttatcgcgactggattcgaacagttttaaagtccaggcaatggtgatttgccct
acgcgcgagctagccgatcaagtttgtaaggaaatccgccagctggcccgccttacccaa
aacatcaaggtactcgtattgtgtggcggagcgccgtttacgtcgcagcgtgcctcgctg
gaacacggcgcgcacgtggtggtcggtacgccgggccgcttgtgggaacatctgcaaaaa
cacagcttacggctggagcacctgaaagtgttggtgctggacgaagccgaccgcatgctg
gacatggggttcgccgatatcatcaccgatgtgatttcccacgcgcctagccaccgccaa
accctattgttttcggcaacgtattcagaggccgtgcgagccttgagccaacgctttcag
ttcagaccggtgtccgtcagtgtcgaagtcagccaccgcgacaatgacatcgaacagcgt
tttcaccggatcgacaagaacaagcggctaaatgccttgggttatatgctggcctatcat
cgccccgaatcgacggtggtgttttgcaataccaaacgcgagtgccaggacgtagccgac
accttggctcactgcggtttttcggtacaagccctacacggcgacctggagcaaaaggat
agagatcaggtattggtgcgcttcgccaacaaaagttgctcgatcttggtcgccacagac
gtggcggccaggggcttggatattaaagacatccaagcggtgattaattacgagctgccg
ttcgatccggaagtctacgtgcatcgcatcggtcgcaccggccgggccggcgccaagggg
ctggcgttgagtctggtcggcgacgcggagttaaaccgggtcaaggccatcgaagactat
atgaatgtcggcgcgcggtgggacgaagtcgcgccgttccgactcgaccgcgaggaacgc
tacgagccgccgatggtgactttgtggatagacggcggccgcaaggacaagatgcggccc
ggcgacatcctgggcgccctaaccggcgccggcggcgtagccggcggcgaagtcggcaaa
atcgacgtgttcgataagcaggcttacgtcgcgatcaaacgcgaccgtgccgacatggca
ttggcctgtttacgcaaaggcaagatcaagggccatcgttttaacgtgcgcctatcgcaa
tggtaa
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