Methylomonas sp. UP202: QC632_23845
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Entry
QC632_23845 CDS
T10336
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
meup Methylomonas sp. UP202
Brite
KEGG Orthology (KO) [BR:
meup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meup03000
]
QC632_23845
Transcription factors [BR:
meup03000
]
Prokaryotic type
Helix-turn-helix
Other families
QC632_23845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
HTH_29
MCM
HTH_7
IIGP
HTH_50
RWP-RK
KAP_NTPase
HTH_23
HTH_1
HTH_28
AAA
AAA_16
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WGS86038
LinkDB
All DBs
Position
complement(5391924..5393672)
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AA seq
582 aa
AA seq
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MDIALRLPETAKIVQETFLYKRTLEFEVDRPVQAWRWMNQTRSVPDQSDWVRPEVAEAWR
RCLEDYQLPLGNFANWQRSGQGVVGGDAQSRQIAESLADLGHQFHVFLKEAGVMLVLTAA
DGALLQALGENPFPSPFMRNLYEQNSRWSEAVLGNNGIGSAALLKRPVAFQGMEHFLSLL
HPFSTVGYPLLDDSGELLAVIGLIADRQESMNSLFAFLHLLCVVLNTNLPLTRSPAAQAR
VLEKIPFKLAKRPPQTEEPAMSEQLAALVDKAVKLQQYKIPILITGESGVGKDHFVNLLK
HAGPRREQPLIAINCASIPHDLIESELFGYEAGSFTGARSGGKPGKFLLADGGILFLDEI
GDMSLDLQSTLLRVLETSEFTPVGGAKPIRVDVQIVAATNVPLLDAVEAGRFRRDLYYRL
NGAQIHLPPLRERQDKQAIIHHILQRELAKMPNAQAIGICPSVIALIEQHPWPGNIRQLI
NVIRATLYTAGGNFITREDLPVDFVAELAKTARESEPELEASPRASQPGRAMTLEDWELY
GIKTTLRACAGNISQAAKALGITRTTLYKKIDRFGLSRMASE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcgttacggttacccgaaaccgccaaaattgttcaggaaacctttctgtac
aagcgtacgctggaattcgaagtcgaccgcccggttcaagcctggcgatggatgaatcaa
acccgctccgtccccgatcagagcgactgggttcggccggaagtggccgaagcttggcgg
cgttgcttggaggactatcaattgccgctagggaatttcgccaattggcagcgttcgggc
cagggcgttgtcggcggcgatgcgcagtcccgccagatcgccgagtcgctggcggacttg
ggtcaccaatttcacgtgtttttgaaagaagccggcgtgatgctggtgctgaccgccgca
gacggcgcgttgttacaagctctaggtgaaaatcccttccccagcccgttcatgcgcaac
ctgtacgaacaaaacagccgttggagcgaagcggtgctgggcaacaatggtatcggtagc
gcggccttgctgaaacggccggtcgcctttcaaggcatggagcatttcttgagtttgtta
catcctttcagcacggtcggttacccgttgctggacgacagcggcgaattgctggcggtg
atcggcctgattgccgatcgccaggagagtatgaattccttgttcgcctttctgcatctg
ctatgcgtggtgttgaataccaatctaccgttaacgcgaagtccggcggcgcaggccagg
gtcttggaaaaaatcccgttcaaattagcgaaaaggccgccgcaaaccgaggaaccggcc
atgtcggagcaattggcggccttggttgataaggcggtcaagttgcagcaatacaagatt
cccatcctgatcaccggcgaatccggcgtcggtaaggatcacttcgtcaatctcctcaag
catgccgggccacgccgggagcagcccttgatcgcgatcaattgcgcctcgataccgcac
gatttgatcgaaagcgagttatttggctatgaagccggcagcttcaccggcgcccgcagc
ggcggtaaaccgggcaaatttttgttggccgacggcggcattttgtttttggacgaaatc
ggcgatatgagcctggatttgcaatccacgttgctccgggtattggaaacctccgaattc
acgccggtcggcggcgccaagccgattcgggtcgatgtgcagatcgtcgcggccaccaat
gtgcctttgctggatgcggtcgaggccggtcgctttcggcgcgacttgtattaccgtctc
aacggcgcgcaaatccacctgccgccattacgtgagcggcaggacaaacaggccatcatc
catcacattctgcagcgcgaactcgcgaaaatgcccaacgcacaagcgatcggtatatgt
cccagcgtcattgccttgatcgagcagcatccgtggcccggcaatattcggcaattgatc
aacgtaatacgcgccacgctgtataccgccggcggcaatttcatcacgcgcgaggatctg
ccggtggactttgtcgcggaactggcgaaaaccgcgcgggagtccgaaccggagttggag
gcctcgcccagggcgtcgcagccgggacgggcgatgacgctagaggattgggaactttac
ggcatcaaaaccacgttgcgggcttgcgccggcaacatttcgcaggcggccaaggcgcta
ggtatcacccgcaccacgctgtacaagaaaatcgaccggttcggcctaagccggatggcc
agcgagtag
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integrated database retrieval system
