Candidatus Methanogranum gryphiswaldense: KRP56_00035
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Entry
KRP56_00035 CDS
T08253
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KRP56_00035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meuz03021
]
KRP56_00035
Enzymes [BR:
meuz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KRP56_00035
Transcription machinery [BR:
meuz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
KRP56_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
UAL07706
LinkDB
All DBs
Position
complement(5834..8641)
Genome browser
AA seq
935 aa
AA seq
DB search
MMRGITKRIGSIKFSCVSPEEIRKMSATKIITADTYDDEGYPIEMGLMDPHMGVIEPGLR
CKTCGCKVDECPGHFGHIDLAMPVIHVGFIKDIKMMLESTCRSCGRLMLSPDQIQERMKD
MDEMRDLGGGTIEVKNFSKATAKDASTKGICPYCGAEQIKIKLDKPTTFREVDDNHKLTP
KEVRERLERIPDEDLTTLGMDPATCRPEWMVLTALAVPPVTVRPSITLDSGDRSEDDLTH
KLVDVLRINQRLRENRDAGAPQLIVEDLWELLQYHITTYFDNQTSGIPPARHRSGRPLKT
LAQRLKGKEGRFRSNLSGKRVNFSARTVISPDPLLSINDVGIPIRAARELTVPVHVNEHN
ITKIREMITRGPEPGDEGEYLPGVNYVIRPDGRRIRVTQRNAAEVAENIAIDYAVERQLV
DGDVVLFNRQPSLHRMSMMAHRVKIMPGRTFRFNLCDCPPYNADFDGDEMNLHVLQSDEA
RAEARIIMQVQENILSPRYGGPIIGAIHDHITGAYFLTYKNPHFDMFEAMNILSKLDDIK
IPEPFVDDKGKQYWTGKQLFSIVLPEDFRTTFKANICVNCKGGCKKEDCQYDAYVKIRDG
KLLCGTIDTKGIGNSKGKILDRIARDYGSDRACLFINQVTRLALGALMNHGFSTGIGDED
IPEEAALQIANYNQECINKVTDLVSSYQDGTLEQMPGRSLRETLEVEVMKTLGDARDEAG
RIAGKHLGMSNPAVIMAKAGARGSMLNLSQMAGCVGQQAVRGERLARGYWDRTLPHFEKG
DLGAYARGFCSNSYKTGLNPTEFFFHAMGGREGLVDTAVRTSRSGYMQRRLVSALEDLKL
TSDGTVRNTIGTVVQFKYGEDGVDPTRTVRGKAIDLDDLFAEVLGENADRILHHTDDRDI
GDDYGSREKDEMEYTEEEESEEFDDLDTDYEGGGE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcggaataacaaaaaggatcggatcgatcaaattctcctgcgtttccccagag
gagatcaggaaaatgtccgctaccaagatcatcaccgcggacacgtatgatgatgaagga
tatccaattgagatgggactcatggacccccatatgggtgtcatagagccaggtctacgc
tgtaaaacatgcggatgcaaggtcgacgagtgtcctggacactttgggcacatcgatctt
gcgatgcctgtgatccatgtcggattcatcaaggacataaagatgatgcttgagagtacc
tgccgctcatgcggaaggctcatgttatcacctgaccagatccaagagcgtatgaaggat
atggatgagatgagggacctcggaggaggaacgatagaggtcaagaacttctccaaggcc
acagctaaggacgcatccacaaagggaatatgtccctattgcggtgctgaacagatcaag
ataaaacttgataagcccacaactttcagagaggttgacgataaccacaaacttacaccg
aaagaggtccgtgagagactggagcgcatacctgacgaggacctgaccacacttggaatg
gatcccgccacatgtaggcctgaatggatggtattgaccgcattggcagtgccacctgtg
accgtaaggccatctataaccttggattctggagacaggtccgaggatgatctaacgcac
aagcttgtcgatgtccttaggatcaaccagagactaagggaaaatcgtgatgcaggagca
ccacaattgatcgtcgaagatctttgggagcttctccagtatcatataaccacatatttc
gacaatcagacatctggaatcccacctgcaagacacaggtccgggcgtcctttgaagaca
ctcgcacagaggttgaagggtaaggaaggtcgtttcagatctaatttgtccggaaagcgt
gttaatttctctgctcgtacggtcatatcaccagatccgttgctttcgatcaacgatgtc
ggaatacccataagggcggcaagggaactgacagtgcccgttcatgtgaatgagcacaac
atcacaaagataagagagatgatcacccgtggaccagagcccggagatgaaggagaatac
cttcccggagtgaactatgtgatcaggcctgatggtagaaggatcagggttacacagagg
aacgccgcagaggtggccgagaacatagccatagattatgctgtcgagagacagttggtc
gacggagatgtggttctcttcaacaggcagccttctctgcacaggatgtccatgatggct
caccgtgtgaagatcatgcctgggcgtacgttcaggttcaatctatgtgattgtccgcca
tacaatgctgatttcgatggagatgagatgaacctccatgttctgcagagcgatgaagca
cgtgcagaagcgcgtatcatcatgcaggtccaggagaacatcctgtcacccagatacgga
ggtccgatcatcggtgcgatccacgaccatatcacaggtgcctacttccttacgtataag
aatcctcatttcgacatgttcgaggccatgaatatcttgtccaagttggatgatatcaag
atccccgagccatttgtcgacgataaaggaaagcaatactggacgggcaagcagttgttc
tcgatcgtcctgccggaggatttccgcacgacattcaaggcgaacatctgcgtaaactgt
aaaggcggatgcaagaaagaggactgtcagtatgacgcatatgtcaagatacgtgatgga
aagctcctttgtggaaccatcgataccaaaggtatcggtaacagcaaaggaaagatcctt
gaccgtatcgctcgtgactatgggtccgaccgtgcatgtctgttcataaaccaggtaaca
aggctagcattgggtgcgttgatgaatcacggattcagtaccggaatcggcgacgaggat
atacccgaagaggctgcattgcagatcgccaactataaccaggagtgtatcaacaaggtg
acggacctcgtatcttcataccaggacggaaccctcgagcagatgccaggacgttcattg
agagagaccctcgaggtcgaggtcatgaagaccctcggagatgctcgtgatgaggcagga
cgtatcgcaggaaagcacctgggtatgtcaaaccctgcggtcatcatggccaaagcgggt
gctcgtggatccatgttgaacctttctcagatggccggttgcgttgggcagcaggcagtt
cgtggtgagaggcttgccagaggatattgggacagaactctccctcacttcgagaagggc
gatctgggtgcatacgcaagaggtttctgctctaactcatataagactggactgaatccc
accgagttcttcttccatgctatgggaggaagagaaggactggtcgataccgcggtcagg
acatcaaggtccggttacatgcagagaagactggtatctgcacttgaagatctaaagttg
acatctgatggaactgtcagaaacacaatcggaaccgttgttcaattcaaatacggagag
gacggagtggatcccacaaggaccgtaaggggaaaggccatcgatctggatgatctgttc
gcggaagttctaggtgagaatgccgataggatattgcatcacactgacgaccgtgatatc
ggtgacgattacggatccagagagaaggatgagatggagtatacagaggaagaggaaagc
gaagaattcgacgacctcgatactgattacgaaggaggaggtgagtga
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