Candidatus Methanogranum gryphiswaldense: KRP56_00170
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Entry
KRP56_00170 CDS
T08253
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meuz03032
]
KRP56_00170 (gyrA)
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_00170 (gyrA)
Enzymes [BR:
meuz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KRP56_00170 (gyrA)
DNA replication proteins [BR:
meuz03032
]
Prokaryotic type
DNA Topoisomerases
KRP56_00170 (gyrA)
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KRP56_00170 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
UAL07723
LinkDB
All DBs
Position
complement(29723..32176)
Genome browser
AA seq
817 aa
AA seq
DB search
MDGERRIIQQGIEQQMQRSYIDYSMSVIVGRALPDVRDGLKPVHRKILFAMSELGLQSNR
PYKKSATVVGEVLGKYHPHGDSAAYESMVRMAQPFSLRYVLVDGQGNFGSVDGDSAAAMR
YTEARLSKMSNDLLENLDKDTVDMVDNYDGSLKEPSVLPAKLPNLLVNGSDGIAVGMATK
MPPHNLTEVCTAIKYTIDNPDVTTLELMDYVPGPDFPTGGTIYGRDGIVSAYETGRGKIK
VRANTHFEDMPNGKVRIIVDEIPYQVNKAMLIENIADQVKNKTLENITDLRDESDRSGMR
IVIELHKDALENVVLENLFKKTQMEVTYGIINLALVEGKPTLLGLKQLICYYLAHRKTVV
ARRTQYDLSQAEKRYHILEGLMKALDMLDETIALIRASDSAEEANSGLQTLLSIDQDQAK
AILDMKLQKLTGLEIGSIKQEYDSLILVMNDLKDILSNEKRVLDIIKVELDEMVQSYGDK
RRTTINVNALDVDLEDLIEKQDLVITISADNYVKSIPLNTYRQQARGGVGLIGMQTKEED
HVKSMFITSTHDYLMFITNHGRLHWLKGYKVPEGSRQSKGKPIINLLSDLEEGEKVEDTI
CVHDFPDDKYLVFCTKNGLMKKTSLSAYSNVRSKGIKAIKLEGDDELVETAITDGNEQII
LASKKGFACRFNENDVRSTGRDTMGVKGMTLNKGDYVISMAAVRAGDKLLSVSENGYGKI
SEVDDYRLTRRGGKGVITIKTDERNGDVICVRKVNLDDQLLVTSKQGKIIRMFVNEIRET
ARNTKGVKIMDMRNDDKITAVQPLISDAEEEAKLPEA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggacggagagagaaggatcatacagcagggaatcgaacagcagatgcagcgttcttac
atcgattattcgatgagtgtcatagttggacgtgcactgccagatgtacgtgatggtttg
aagcccgttcatagaaagatattgttcgccatgtctgagttgggacttcagagcaatcgt
ccctacaagaagtcggctactgtggtgggagaggtccttggtaaataccaccctcatggt
gattctgccgcatatgaatcgatggtgaggatggcacagccattttccttgaggtatgtt
ttggttgatggacagggtaactttggatctgtcgacggtgacagtgcagcagctatgcgt
tatactgaagcacgtttatcaaaaatgtccaacgatcttctggagaatctcgataaagat
acagttgacatggtcgacaattatgatgggtctttgaaagagccttctgtgttgccggca
aagttaccaaatctcctggtcaatggttctgatggtatagctgtcggaatggctacaaaa
atgccgccacataatctaactgaagtatgtacggcaataaagtatacgatagacaatcct
gatgtgaccaccctcgaactcatggattatgttccaggtcctgattttcctacaggaggc
acgatctatggtcgtgatggaatagtatctgcatatgagacgggaaggggaaagataaag
gtcagagccaatacacactttgaggacatgccaaacggcaaggtccgcattatcgtcgat
gagataccatatcaggtcaacaaggcaatgctcattgagaacatagctgaccaggtgaag
aacaagaccctcgagaatatcacagatcttcgtgatgaatcggacagatctggaatgcgt
atcgttatagagcttcacaaggacgcactcgaaaacgtggtgctcgagaatctcttcaag
aagacccagatggaagtaacgtacggtataatcaatttagcattagtcgaaggaaaacct
acacttctgggacttaagcagttgatatgctactatctcgctcacaggaagacggttgtc
gcccgcagaacacagtatgatctgtcccaggcagagaagagatatcatatcttagaaggt
ttgatgaaagcattggatatgctcgatgagaccattgcattgatacgtgcatcagactcg
gcagaggaagccaattccggtctgcagaccttgttgagcatcgatcaggatcaggctaaa
gcaattttggacatgaagcttcaaaaattgaccgggctcgagatagggtccataaagcaa
gagtatgacagcctgatattggtcatgaatgacttgaaagatatcctctctaacgaaaag
agggtgttggacataatcaaagtcgaactcgatgagatggtccagtcctatggtgacaag
cgccgcaccacgatcaatgtaaatgcattggatgtcgatctggaggatctcattgagaaa
caagacctcgtgatcacgatatcagctgacaattacgtcaagagcatacctttgaacaca
tacagacagcaggcccgcggaggagtggggcttatcggtatgcagacgaaggaagaggat
catgtcaaaagcatgttcataaccagcacacacgactaccttatgttcataacgaaccac
ggacgccttcattggttgaaagggtacaaagttccagagggaagcagacaatccaaagga
aagccgataatcaatctcctatccgatctggaagagggggagaaggtggaagacacgatc
tgcgtccacgatttcccagatgataaatatctggtgttctgcacaaagaacggtctgatg
aagaagacctctcttagcgcatacagcaatgtcaggagcaaaggtatcaaggcgatcaaa
ctggagggagatgacgagctcgtagagaccgctatcaccgacggaaatgagcagataata
ttggcctccaagaaaggatttgcttgcagattcaatgaaaatgatgttcgctccaccggt
agggacacgatgggggtcaagggaatgacccttaacaaaggagattatgtaatatccatg
gcagcggtgagagctggtgacaagttgctctcggtcagtgagaatggatatggaaagatc
tcagaggtcgatgattatcgtctgactcgtcgcggaggaaagggtgtaataacgataaag
accgatgaaaggaacggagatgtcatttgtgtcagaaaggtcaatctcgacgatcaatta
ttggtcaccagtaaacagggcaagatcatacgcatgttcgtaaacgagatccgtgaaact
gcacgcaataccaaaggcgtcaagataatggatatgcgcaatgatgacaagatcactgct
gtacagcccctgatctctgatgcagaggaagaagcgaagttacccgaggcatga
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