Candidatus Methanogranum gryphiswaldense: KRP56_01050
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Entry
KRP56_01050 CDS
T08253
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz00630
Glyoxylate and dicarboxylate metabolism
meuz00710
Carbon fixation by Calvin cycle
meuz01100
Metabolic pathways
meuz01110
Biosynthesis of secondary metabolites
meuz01120
Microbial metabolism in diverse environments
meuz01200
Carbon metabolism
Module
meuz_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KRP56_01050
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
KRP56_01050
Enzymes [BR:
meuz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
KRP56_01050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
B2
Motif
Other DBs
NCBI-ProteinID:
UAL07883
LinkDB
All DBs
Position
188132..189370
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AA seq
412 aa
AA seq
DB search
MKCYSYMHLGESVDLDKYVVCKYRVTTDLSMEKACEAIAAEQSTGTWTGISTLSQEIFEN
YGARVIEINGDMVTIAYPEEDFSIENGGIPQILSVIAGNLFGLDALKGVRLEDVAFSKGI
MEMYKGPKFGADGLREILHRPEKPLVGTIVKPKIGLNPRDTANYVYEAGSGGLTNSKDDE
TLVDQKFCPIEDRTIAIADVLDRLKEEGHYMVHAVNVSTNGDKIVELAEKVQSWGAKQIM
VDVITCGFGAVQALSEDRSIKVPIHVHRTMHGAMTKDPLHGVSMLAMTRLVRMCGGDALH
IGTLGVGKMTGNVKGDYDNLQACLNKSEYYKTVMPVCSGGVYPGMIGKLIEEAGKNIQIQ
AGGGVAGHPGGVRKGAMGMCQAVDAACLGIPPQEYAKSHPELQAALDKWGMK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgttattcgtatatgcaccttggagagtccgtcgatctagacaaatatgttgtt
tgtaagtatcgtgtcacaacagatctttccatggaaaaagcttgtgaagccatagctgca
gagcaatcgaccggtacatggactggtatctctacgctgagtcaagagatatttgaaaac
tacggtgcgagagtaattgagataaatggagacatggtcaccatagcctacccagaagaa
gatttcagtattgagaacggaggcattcctcaaatactcagtgtcatcgcaggaaatcta
ttcggattggatgcattgaaaggagtaagactggaagatgttgctttttcgaaagggatc
atggagatgtacaaaggtcctaaattcggtgcagacggccttagggaaatattacaccgt
cccgagaaacctctggtcggtacgattgtaaaaccaaagatcgggctgaatcctagggac
acagcgaattacgtctatgaggctggaagtggcgggctcaccaacagtaaggatgatgag
acccttgttgatcagaagttctgtcctatagaggaccgtacaattgctattgctgatgtt
ttggacagactcaaagaagagggacactatatggtccacgctgtgaatgtcagtacgaat
ggtgataagatagttgaattggccgagaaggtccaatcatggggagctaaacagataatg
gtcgacgtgatcacatgtggatttggcgctgttcaagcattgtcagaggataggtcgata
aaagtaccgatacatgttcatagaacaatgcacggtgcgatgacaaaagacccattacac
ggtgtttccatgcttgcgatgacaagacttgtacgtatgtgtggaggagatgcgcttcat
atcggtacgttaggggtcggaaaaatgactggaaacgtcaaaggagattatgacaatctt
caagcgtgcctcaataaatcagaatattacaagacagtaatgccagtttgttcaggtggt
gtatatccaggtatgattgggaaactgatcgaggaagcagggaagaacatccagatacag
gcgggtggcggtgttgctggacacccaggtggtgtaagaaagggggcaatgggcatgtgc
caagctgttgacgcagcatgtcttggtattccgcctcaagaatatgcgaaaagccatcct
gaattgcaggcagctcttgacaagtggggaatgaaatga
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