Candidatus Methanogranum gryphiswaldense: KRP56_01050
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Entry
KRP56_01050 CDS
T08253
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz00630
Glyoxylate and dicarboxylate metabolism
meuz01100
Metabolic pathways
meuz01110
Biosynthesis of secondary metabolites
meuz01120
Microbial metabolism in diverse environments
meuz01200
Carbon metabolism
Module
meuz_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KRP56_01050
Enzymes [BR:
meuz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
KRP56_01050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
B2
Motif
Other DBs
NCBI-ProteinID:
UAL07883
LinkDB
All DBs
Position
188132..189370
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AA seq
412 aa
AA seq
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MKCYSYMHLGESVDLDKYVVCKYRVTTDLSMEKACEAIAAEQSTGTWTGISTLSQEIFEN
YGARVIEINGDMVTIAYPEEDFSIENGGIPQILSVIAGNLFGLDALKGVRLEDVAFSKGI
MEMYKGPKFGADGLREILHRPEKPLVGTIVKPKIGLNPRDTANYVYEAGSGGLTNSKDDE
TLVDQKFCPIEDRTIAIADVLDRLKEEGHYMVHAVNVSTNGDKIVELAEKVQSWGAKQIM
VDVITCGFGAVQALSEDRSIKVPIHVHRTMHGAMTKDPLHGVSMLAMTRLVRMCGGDALH
IGTLGVGKMTGNVKGDYDNLQACLNKSEYYKTVMPVCSGGVYPGMIGKLIEEAGKNIQIQ
AGGGVAGHPGGVRKGAMGMCQAVDAACLGIPPQEYAKSHPELQAALDKWGMK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgttattcgtatatgcaccttggagagtccgtcgatctagacaaatatgttgtt
tgtaagtatcgtgtcacaacagatctttccatggaaaaagcttgtgaagccatagctgca
gagcaatcgaccggtacatggactggtatctctacgctgagtcaagagatatttgaaaac
tacggtgcgagagtaattgagataaatggagacatggtcaccatagcctacccagaagaa
gatttcagtattgagaacggaggcattcctcaaatactcagtgtcatcgcaggaaatcta
ttcggattggatgcattgaaaggagtaagactggaagatgttgctttttcgaaagggatc
atggagatgtacaaaggtcctaaattcggtgcagacggccttagggaaatattacaccgt
cccgagaaacctctggtcggtacgattgtaaaaccaaagatcgggctgaatcctagggac
acagcgaattacgtctatgaggctggaagtggcgggctcaccaacagtaaggatgatgag
acccttgttgatcagaagttctgtcctatagaggaccgtacaattgctattgctgatgtt
ttggacagactcaaagaagagggacactatatggtccacgctgtgaatgtcagtacgaat
ggtgataagatagttgaattggccgagaaggtccaatcatggggagctaaacagataatg
gtcgacgtgatcacatgtggatttggcgctgttcaagcattgtcagaggataggtcgata
aaagtaccgatacatgttcatagaacaatgcacggtgcgatgacaaaagacccattacac
ggtgtttccatgcttgcgatgacaagacttgtacgtatgtgtggaggagatgcgcttcat
atcggtacgttaggggtcggaaaaatgactggaaacgtcaaaggagattatgacaatctt
caagcgtgcctcaataaatcagaatattacaagacagtaatgccagtttgttcaggtggt
gtatatccaggtatgattgggaaactgatcgaggaagcagggaagaacatccagatacag
gcgggtggcggtgttgctggacacccaggtggtgtaagaaagggggcaatgggcatgtgc
caagctgttgacgcagcatgtcttggtattccgcctcaagaatatgcgaaaagccatcct
gaattgcaggcagctcttgacaagtggggaatgaaatga
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