Candidatus Methanogranum gryphiswaldense: KRP56_01180
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Entry
KRP56_01180 CDS
T08253
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRP56_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_01180
Enzymes [BR:
meuz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KRP56_01180
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRP56_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UAL07904
LinkDB
All DBs
Position
212049..212582
Genome browser
AA seq
177 aa
AA seq
DB search
MRPDSDCRLCGLCEGRINMVLPSGDLDSKVVFVGEAPGEKENLCGKPFVGRSGQLLDKIM
EEEGLDRSSIMITNTVKCRPPNNRDPTKEEMAACRPFLDSELYDKHLIVGLGKSSCRDLM
GYEGKMSDIVNTIQKITIGDREVIFIPTYHPAACIYSKDARQGLKDTMKIVKENYLR
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagattcagattgtaggctttgcgggctttgtgaaggccgcatcaatatggtc
cttccaagtggagatctcgattccaaggtggtatttgtgggtgaagctcccggtgagaag
gagaatctatgtggaaagccattcgtaggacgttccgggcaacttttggataagatcatg
gaagaagagggcctcgataggtcaagtataatgataaccaacacagtaaaatgtcgtcct
ccgaataatagagaccctacgaaagaggagatggcggcctgccgtccatttttagattca
gagctttatgataagcacttgatagtcggcctgggaaagtcatcatgtagagatcttatg
ggttatgaaggtaaaatgtcggacatagtcaataccattcagaaaataacaattggggac
agggaagtaattttcattcctacatatcatccggccgcgtgcatatacagcaaggatgcc
agacagggattgaaagatacgatgaagatcgtaaaagaaaattatttgaggtga
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