Candidatus Methanogranum gryphiswaldense: KRP56_01500
Help
Entry
KRP56_01500 CDS
T08253
Name
(GenBank) HRDC domain-containing protein
Organism
meuz
Candidatus Methanogranum gryphiswaldense
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_12
AAA_11
HRDC
AAA_30
DUF4011
DUF559
DEAD
AAA_19
SLFN-g3_helicase
nSTAND3
ResIII
PhoH
DAP3
Clathrin
nSTAND_NTPase5
IstB_IS21
DUF3969
RNA_helicase
AAA_5
UvrD-helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UAL07961
LinkDB
All DBs
Position
complement(264694..268422)
Genome browser
AA seq
1242 aa
AA seq
DB search
MGLDNDLYSELCDLRDRLRRENTYSNGREPPICDDDALNEMALRIPTKLEDFQAIVGIGP
KFVEIYGDEFLSITKKYAITAAKGSCMDKDVVQTLRDLQKKLINISRANRLLFQPKTTKK
LSFDLIKIQNQDYMGLLFGKKRVLKLCDTARGKEDAQIYKDLNEIIREVNRDQRERGQYD
LYIAYPFAEGKLPGDEFDIRCPLALFPVILEKDARSISLSFDSSRDPVYNNSLVTAFVKF
SGKNRPLPNNVIDDYTAESFISNLIQFYADQKIPINCVYGLPTEFVEYKTGEFPKYGPGE
IHMVQNMVLGKYPTYSNSIQKDFDDLISKGEINEILCDLVADLNLSDYLSELPHPLSAED
IKSRGMETSEVNITYINSLNSAQENVLTAINKDDRLVVQGPPGTGKSQVITGLITSAITE
GKTVLMVSEKKTALDVVYSRLGNLSKYCLMIDDVCDKEDFYMQLGHMLETKNCKSGTDLK
ELSESIDQDVDMLSNIANAIYTPCEFGIAPYKLYSMDKWLDLTDKRQLDEYRTIKNNVSS
KILGLKYPVVKELTREYHDPTLMTNFKEYCDCIDKTPWLTLMKPNLSEYNVGEMKADLLD
LEGQIKDLNSKGFMSRLFSKGKVNRETTLMLDKYFVNYNEQTINTFMNDPKSIIDRLNDY
DLYSARATVYNKLNEDERIYGHNLLAMSKEMKVSFEESNDQMYKYILNTHLQEFDAANKM
ILQEIQDFDSIIANIDRKIEQKKILTRDKVEEVLQENLRYITESKRRGDINRIIENKRKW
SLNKFINRYGYELFKGVKVWLLTPEVVSEIIPLEMGVFDLLIFDEASQMYVEKGIPSIYR
AKKVVIAGDNKQLRPSNLGTGRIDFESDDDNSEDDEVSAALEEESLLDLARSRYDNILLN
FHYRSKYEELIAFSNYAFYGGKLYVSPNVVQPEKPPIEAHKVNGVWENKANMAEAQKVLE
LLKDFFMTRKENETIGIITFNVSQRDLINDLIDEESSKDQVFGKTVNDEARRFDNGEDVG
LFIKNIESVQGDERDVIMFSIGYAKNKDGKLMQRFGWLNNRGGENRLNVAISRAKKKIHI
VTSFDPEELQIDDSKNDGPKILKKYLQYAWAVNNGQKDLAISILNSFGNERWESDKIIHD
DSTVLDRIYNTLVRKGYTVERNIGIGGYQIDLAIKQDGKFILGVECDSHIYEMSTTTRER
DYHRQKYLESRGWHIHRVWTPGMWKNSEEEINKIVRAIEHKA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggactagataatgatctttattctgagctttgcgatttgagggatcgccttcgcaga
gaaaatacctactctaatggtagagaaccccccatctgtgatgacgatgcgttaaatgag
atggctttacgcatacccacaaaactcgaagattttcaggctattgtcggcataggtcca
aaattcgttgaaatctacggtgatgaattcctaagcatcacaaaaaaatatgctataact
gcagccaaaggaagctgtatggacaaggatgttgtccagaccttaagagatcttcagaag
aaactgataaacatcagtagggcgaatcgtcttcttttccaaccgaagacgaccaaaaag
ctatcattcgacctcataaagattcaaaaccaagattacatgggacttttgttcggaaaa
aaacgtgtactcaaactatgtgacaccgccagaggaaaagaggacgcccagatatacaag
gacctaaacgagatcataagggaggtcaacagggaccaaagggaaagaggacaatacgac
ctctatattgcatatcccttcgcagaaggaaaactacctggagacgaattcgacatacgt
tgcccgcttgcactatttcctgtaatattggaaaaagatgccaggtccatatccctctcc
tttgattcgtcaagagacccagtatacaacaactcactagtaaccgctttcgtcaaattc
agtggaaagaaccgccctcttccaaataacgttatcgatgactacacggcagaatcattc
atttccaatcttatccaattctatgcggatcagaagatacctatcaactgcgtatacggc
ctacccaccgaattcgtcgagtacaagactggagaattcccgaaatacggtcctggcgag
atccatatggtccagaatatggtacttggaaaatatcccacatattccaacagcatccaa
aaggattttgatgacctcatttccaaaggcgagatcaatgagatcttatgcgaccttgtt
gcagaccttaacctaagcgactatctatctgagctaccccacccgttgtcagcggaggac
ataaagagcagggggatggaaacctcagaggtcaatatcacttacataaactccctgaac
agtgcacaagagaatgtactgacggccataaacaaagatgacagattggtcgtacaaggc
cctccaggtacaggaaaatcacaggtcatcacaggactgataacctctgcgatcacagaa
ggaaaaacggtcctgatggtttctgaaaagaagacggcattggatgttgtctattcaaga
ctgggcaatctctccaaatattgtctgatgatcgatgatgtgtgtgacaaagaagatttc
tatatgcaattgggccatatgttggagactaagaattgcaaatcgggaacggatctcaaa
gaactatccgaaagcatcgaccaagatgtcgatatgctttccaacatcgccaatgcaata
tacactccgtgtgaattcggaatagcgccttacaaattatactccatggataagtggctc
gacctgacggacaaaagacaattggacgaatacaggacgatcaagaacaacgtatcttca
aagattttgggcttgaaatatccggtcgtgaaagaactgaccagagaatatcatgaccct
actctgatgaccaacttcaaagagtactgtgattgcatcgataagacgccatggcttaca
ttgatgaaacccaatctttctgaatacaatgtcggagagatgaaggccgacctattggat
cttgaaggccagatcaaagatctcaacagtaaaggtttcatgtcaagacttttctcgaag
ggaaaggtcaaccgtgagaccacactcatgctggacaaatactttgtaaattacaatgaa
cagaccatcaatacgttcatgaatgatcccaagagcatcatcgacaggttgaatgattat
gacctgtactctgcaagggcgacagtatacaataaattgaacgaggacgaacgcatctac
ggacacaatctcctcgctatgtctaaagagatgaaggtctccttcgaagaaagcaacgac
cagatgtacaaatacatcttaaatacccatcttcaggaattcgatgccgcgaacaagatg
atacttcaagagattcaagatttcgatagcataattgcgaatatcgatagaaagatcgaa
cagaagaagatcttgacccgtgacaaggtagaagaagtgctccaagagaacctcagatac
ataactgaatccaagagacgcggagacattaacagaattatagagaacaaacgcaaatgg
tccctcaacaaattcataaatcgctacggatacgaacttttcaaaggagtgaaggtctgg
ctgctgacacctgaagtggtatcggaaataataccgctggagatgggcgtgttcgacctt
ctgatattcgacgaagcctcccagatgtacgtggaaaagggaataccttccatatacagg
gcaaagaaggtcgtcattgccggggacaacaaacagcttcgtccctcgaatctcggtact
gggcgtatcgatttcgaaagcgatgacgataacagtgaggacgatgaggtctccgcggca
cttgaagaagagtccttgctcgaccttgcaaggtcccgttacgacaacatactcctgaat
ttccattatagatcgaaatacgaagaactcattgcgttctccaattatgcattctacggc
ggtaagctatacgtttcacctaatgtggtccagcctgaaaagcccccgatagaggcccat
aaggtcaatggcgtatgggagaacaaggccaatatggccgaggcccaaaaggtcctggaa
ctactcaaggactttttcatgaccagaaaagagaacgagaccatagggataataaccttc
aacgtttctcaaagggacctcatcaatgaccttatcgatgaggaatcatccaaagaccag
gtattcgggaagaccgttaacgatgaggctcgccgtttcgacaacggagaagatgtgggc
ctgttcataaagaacatcgaaagcgtccaaggcgatgaaagagatgtcataatgttctcc
ataggatatgcaaagaacaaggatggaaaacttatgcagagattcggttggttgaacaac
cgcggaggagaaaaccgtctcaacgttgcgataagccgtgcaaagaaaaagatacacatc
gtcacttccttcgaccctgaagaacttcagatagatgactccaagaatgatggcccgaag
atactgaagaaatacctacagtatgcctgggcggtcaacaacggacaaaaggacctcgca
ataagcatactcaactcttttggcaacgaaagatgggaatcagataagataatacacgat
gactcgacggtcctggaccgcatatataacactcttgtcaggaaaggctacacggtcgaa
aggaacattggtatcggaggataccagatagaccttgcgataaaacaggatggcaaattc
atattgggcgtggaatgcgacagccacatctatgagatgtccaccacaacaagggaaagg
gactatcacagacagaaatatcttgaatccagaggatggcacatacacagggtctggacc
cctggaatgtggaagaactcagaagaagagatcaacaagatagtcagggcgatagaacac
aaagcttga
DBGET
integrated database retrieval system
