Candidatus Methanogranum gryphiswaldense: KRP56_02730
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Entry
KRP56_02730 CDS
T08253
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz00220
Arginine biosynthesis
meuz00240
Pyrimidine metabolism
meuz00250
Alanine, aspartate and glutamate metabolism
meuz01100
Metabolic pathways
meuz01110
Biosynthesis of secondary metabolites
meuz01240
Biosynthesis of cofactors
Module
meuz_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KRP56_02730 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KRP56_02730 (carB)
00220 Arginine biosynthesis
KRP56_02730 (carB)
Enzymes [BR:
meuz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KRP56_02730 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
RRM_DEAH11
GARS_A
Motif
Other DBs
NCBI-ProteinID:
UAL08179
LinkDB
All DBs
Position
514157..517366
Genome browser
AA seq
1069 aa
AA seq
DB search
MRKDYKKLMVIGSGPIIIGQAAEFDFSGTQACRSLREEGYKTVLVNSNPATIQTDADTAD
SVYIEPLQADIVVKIIEKEGVDGIVSGMGGQTALNICSELAESGELARLGVKLVGTQPDA
IEMSEDRDLFKKTMERIGEPVPLSRSVHTIQEALEAVKVIGKYPVLVRPAFTLGGTGGGI
AYSEGELMEICARGLAYSRIHQVLIEESVLGWKELEYEVMRDSVDNCIIVCNMENLDAMG
IHTGESIVVAPLLTISDRDHQRLRTASLKIIRALGIEGGCNVQYALNPENSEYRVIEVNP
RVSRSSALASKATGYPIARVATKIAVGYTLDEIPNKITGTTYAAFEPALDYVVVKIPRWP
FDKFRTVDRHLGTQMKSTGEMMSIGRTFEEALLKGLRSLEIGVKGLDRIEMSDEELMDEL
KHATDRRIFAIGEAIRKGWRIEKIAELAQWDEFFVRKLKNIIDMENRLAKEELTKDLMES
AKRMGFSDDTIGDLVKKNCMEVRKIRKSMGIVPVYKMVDTCAAEFKAETPYFYSTYAKSS
EAVKHTGKKKVVLIGSGPIRIGQGIEFDYCCVHGVMALQEEGVDAIIINNNPETVSTDYD
ISDRLYFDPLDLEDVLNVIEAEDADGVICQYGGQTSVNLAVDLEKALVGTKTKILGTSPD
QMDVAEDRRRFSKLMDDLGIRQPRSGTGYSFEEAKAIAEEIGYPVLVRPSYVLGGRAMEI
VYSTEELKIYVATAVKVSRHHPILIDKYLTEAIEIDIDAVCDQTDVYIGGIMEHVEYAGC
HSGDATMVLPPFTLGRDIIDKMVDITKQVALALKIKGLMNLQLAVKGNEVYMIEANPRAS
RTVPFISKATGIPLAKIGVKLMLGKTLKDFGLSGYRPIDHFAVKASVFPFLKLPGVDSIL
TPEMKSTGEVMGIDEDFDIACYKALTAAGNCLPTEGGVYITVNNADKERVLPIAKELIQM
GFTIYATKGTSTYLREHGVETMTVFKIDDNMSPNAIGLMRADKINLVINTPSEKSGPVRD
GHKMRRLAVELEIPFLTTIQGADAAVGAIKVARDKKFSVKSTKEFHLLR
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaggattacaagaagctcatggtcataggttctggaccgataatcatcggacag
gctgcagagttcgatttctctggaacacaggcatgccgttctcttcgtgaggagggttac
aagacggtacttgttaactctaatcctgcgaccattcagacggatgccgacacagcagac
agcgtttatatagagccgcttcaggccgatattgtggtcaagatcatagagaaagaaggt
gtcgatggaatagtatccggtatgggtggacaaaccgctttgaacatctgttcagaattg
gcagagtcaggagaactggctagactcggagtgaaactcgtaggtacccagcccgacgct
atcgagatgtcggaggatcgtgacctcttcaagaagacgatggagaggatcggggagcca
gtccctctgagcagaagtgttcatacgatacaggaggcattggaggctgtcaaggtcata
ggaaagtaccctgtccttgtgcgtcctgcctttacccttggaggtaccggaggaggtatc
gcatacagcgagggagagctcatggagatatgtgccagaggtctggcttattcccgtatc
catcaggtcctcatcgaggagagcgtccttggatggaaggaattggaatacgaggtaatg
agggattccgtggacaattgcatcatcgtgtgtaacatggagaacctcgatgcgatgggg
atacacactggcgaatccatagttgtggcacctttgctcacgatatcggacagggaccat
caacgtctaaggacagcttcactgaagataatccgtgccctcggaatagagggaggatgc
aatgtgcagtacgcattgaatcctgagaacagcgaatacagggtcatcgaggtcaatccc
cgtgtgtcacgttcatctgcacttgcatccaaggcgaccggatatccgattgcacgtgtc
gcaacgaagatcgccgtaggatacacacttgacgagataccgaacaagatcacaggaact
acatatgcggcgtttgaacctgcccttgattatgtggtggtcaagataccccgctggcca
tttgacaagttccgcactgtcgacagacacctcggtacccagatgaagtccaccggagag
atgatgtccataggacgtacattcgaggaggcactgctcaaaggactcaggtctttggag
atcggcgtaaaaggtctcgaccgtatcgagatgagtgacgaggagctcatggacgagctc
aaacatgccacggataggcgcatcttcgccataggagaggccatcaggaaaggatggagg
atcgagaagatagcggagctcgcccagtgggatgagttcttcgtaaggaagctaaagaat
atcattgacatggagaacagacttgccaaagaggaactcacaaaggacctcatggagagt
gccaaacgcatgggattttccgatgatactatcggcgacctagtaaagaagaactgcatg
gaggtccgtaagatcaggaagagcatgggaattgtcccagtctacaaaatggtggacaca
tgtgcggctgagttcaaagcagagacaccatacttctattcaacatacgcaaagagcagc
gaggctgtgaagcacacgggtaagaagaaggtcgtgctgattggcagtggtccgataagg
atcggccaaggaatagagttcgactattgttgcgtccatggtgtgatggcccttcaggaa
gaaggtgtcgatgccattataatcaacaataatccagagacagtatcgacagattacgat
atatcggatcgtctttatttcgacccgctggatctcgaagatgtattgaatgtcatagag
gccgaggatgccgatggagtgatatgccagtacggcggacagaccagtgtcaatctcgcg
gtcgatctggagaaagcattggttggaacgaagaccaagatactcggtacctcgccggac
cagatggatgtcgcagaggacaggagaaggttctcaaagctaatggacgaccttggaata
agacagcccaggtcgggtactggttattctttcgaggaggccaaggccatagcggaggag
atcggataccctgtcttagtaagaccttcctatgtattgggaggccgtgccatggagata
gtatattccactgaggaattgaagatctacgtggccaccgccgtcaaagtatccaggcat
caccccatattgatcgataaatatctgacggaagcgatagagatcgatatcgatgcggtg
tgcgatcagaccgatgtgtacatcggtggcataatggagcatgtggaatatgcaggatgt
cactccggagatgcgactatggtccttcctccgttcacattgggaagggacatcatcgac
aagatggtggacataaccaaacaggtcgcgctggcacttaagatcaaaggtctgatgaac
ctgcagcttgctgtgaaaggtaacgaggtctacatgatagaggccaatccaagagcttca
cgtactgtgcctttcatatccaaagcaacagggatacctcttgcgaagatcggtgtcaag
ctcatgttgggaaagaccttgaaggacttcggactttcaggatataggccgatagaccat
ttcgctgtcaaggcatctgtgttcccattcctgaaattacccggtgtcgattccattctc
actcccgagatgaagtccaccggagaggtaatgggtatcgacgaggacttcgacatagca
tgttacaaagcgctcaccgccgcaggcaactgtcttcctaccgagggtggagtctatatc
acggtcaacaacgcagataaggagcgcgttctgccaatcgcgaaggaactcatacagatg
ggattcaccatatatgccacaaagggaacttcaacataccttagggagcatggtgtggag
accatgaccgtcttcaagatagacgataacatgagtccaaatgcgataggattgatgaga
gcagacaagatcaaccttgtcatcaataccccatcggagaagtcgggacctgtccgtgac
ggtcacaagatgcgcagactcgccgttgagttggagataccgttcctcaccacgatacag
ggtgccgatgcagctgtcggtgccatcaaggtcgcgagagacaagaagttctccgtcaag
tcgacgaaggagttccatcttctcaggtaa
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