Candidatus Methanogranum gryphiswaldense: KRP56_03405
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Entry
KRP56_03405 CDS
T08253
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KRP56_03405 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_03405 (xseB)
Enzymes [BR:
meuz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KRP56_03405 (xseB)
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KRP56_03405 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Vps53_N
DUF724
Acetyltransf_11
bZIP_1
TPR_11
Motif
Other DBs
NCBI-ProteinID:
UAL08302
LinkDB
All DBs
Position
complement(657501..657734)
Genome browser
AA seq
77 aa
AA seq
DB search
MTNVENMSFEESITALEDMVKKLENGGLDLDESLKTYEEAIALREHCKKILEDSDRKVQK
IMETANGIVKENLELND
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgttgagaatatgagtttcgaagagagcattacagccttggaagacatggta
aaaaagctcgagaatggcggattagacctggatgaaagcctcaagacatacgaagaggcc
atcgcattaagagaacactgtaagaagatactcgaggacagcgatcgcaaagttcaaaag
ataatggaaaccgcaaacggtattgtaaaagagaacttagaactcaacgattga
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