Candidatus Methanogranum gryphiswaldense: KRP56_03455
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Entry
KRP56_03455 CDS
T08253
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03030
DNA replication
meuz03430
Mismatch repair
meuz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRP56_03455
03430 Mismatch repair
KRP56_03455
03440 Homologous recombination
KRP56_03455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meuz03032
]
KRP56_03455
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_03455
Enzymes [BR:
meuz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRP56_03455
DNA replication proteins [BR:
meuz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRP56_03455
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRP56_03455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PnpCD_PnpD_N
Motif
Other DBs
NCBI-ProteinID:
UAL08312
LinkDB
All DBs
Position
complement(670134..670778)
Genome browser
AA seq
214 aa
AA seq
DB search
MSNLFSFDETPDNVVYVLDTETTGLLGAPEDVVVDIGICLVDLDHETVKEVYSAVVGHDV
DSWNDYRKNAWIFQNTDMTLDAVKEGLPFTDVLNDVRSILLKKNVTAYNTGYDFNKFLFR
EPWNLRGTFNQYQDIMLAATYVCKLKSMNYFDDYRWPKLDNAYKMILKDEDPAGINGKQN
HRALSDAKMASHIMIEMHKNGDYPYKKDQCFSSS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccttttctcatttgatgaaacccccgataatgtggtatacgtattagacacg
gaaacgacgggacttttaggggctccggaggacgttgtggtggacattgggatatgcctg
gtggacctagaccatgaaactgtgaaagaggtctattccgctgtagtaggtcatgatgta
gattcttggaacgattacagaaagaatgcttggatattccaaaatacagatatgaccttg
gatgctgtcaaagaaggtcttcctttcactgatgtactgaatgatgtcagatcgatcttg
ttgaaaaagaatgtgaccgcatacaatacaggttatgattttaacaaattcctattccgg
gaaccatggaatctaagaggcacattcaatcaatatcaagatatcatgcttgccgccaca
tatgtctgcaaattaaaatcgatgaactattttgatgattacagatggccaaaacttgac
aacgcttacaagatgatactcaaagacgaagatcctgcaggaataaacggaaagcaaaat
catcgtgcattatctgacgcaaaaatggcatcacatatcatgatagaaatgcataagaac
ggagattatccctacaaaaaagatcaatgtttttcatcatcttga
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