Candidatus Methanogranum gryphiswaldense: KRP56_03815
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Entry
KRP56_03815 CDS
T08253
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_03815
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KRP56_03815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF559
Vsr
MTES_1575
Nop14
Motif
Other DBs
NCBI-ProteinID:
UAL08380
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All DBs
Position
749214..749642
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AA seq
142 aa
AA seq
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MSEDVSIENDFEEMYYSSKKHRLSHAYVLSSKLSKIYSGYKKDIDDLPGCPDIVYLKQKI
AVYCVSDLWHCRDVERVTRDTRYYADFWLEMIARSIRMDLEIDKEMNELGYTVVRVWNSD
IDENPDEVAEYIKKIVDEQKVK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggatgtatcgattgaaaacgattttgaagaaatgtattattcttcaaagaag
catagacttagtcatgcatacgttttatcttcgaaactttctaaaatctattcaggttat
aagaaagatattgacgatcttccaggttgtccagacattgtatatttaaaacaaaagatt
gccgtatattgtgtttccgacctttggcattgcagagatgtagaaagggtcacacgcgat
acaagatattatgccgatttctggttagaaatgatagccagatccattagaatggattta
gaaatcgataaagaaatgaatgaactcggttatactgtagtacgtgtctggaattctgat
attgatgagaatccagatgaggttgcagaatatattaaaaaaatcgtggatgaacaaaaa
gtgaaatga
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