KEGG   Candidatus Methanogranum gryphiswaldense: KRP56_04080
Entry
KRP56_04080       CDS       T08253                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
meuz  Candidatus Methanogranum gryphiswaldense
Pathway
meuz03030  DNA replication
Brite
KEGG Orthology (KO) [BR:meuz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KRP56_04080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meuz03032]
    KRP56_04080
DNA replication proteins [BR:meuz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     KRP56_04080
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_22 Rad17 nSTAND3 RuvB_N AAA_14 AAA_17 AAA_assoc_2 AAA_5 AAA_18 AAA_25 AAA_28 RFC1 AAA_30 MMR_HSR1 DNAX_ATPase_lid IstB_IS21 AAA_33 ABC_tran AAA_24 AAA_16
Other DBs
NCBI-ProteinID: UAL07038
LinkDB
Position
complement(802131..803579)
AA seq 482 aa
MSEDWTEKYRPKTLKDVVGNPSATNEMLSWAKSWDMGIPEKKALILIGTPGVGKTTSAEA
LAIDMGWGIVEMNASDQRTGDIIRDIAVRGANSNTFDNSGNYLDVKNGGRKLIVLDEADN
LFGSVDKGALPAINELIKTTKQPVILIVNDFYALSKKSSAIKTDTIQITFRKPTSRAIVA
ALAAIAKKENITIDTGVLDRITSNSNGDMRAAIRDLESLGLGTQNISYGSADQISERNIK
KDMYAVVDAIFRKNDPGSARAMLSKADSDPETAILWVDENLPYEYREPGDLVRGYEKLCR
ADVYLGRVHRRQYYRFWAYASDMMTMGVATARMNSLVSHERIRFPMYLSKMSHSKNTRAL
KYSICYKLAVLNHTSTKRVEFDILPNVKQLCRNSEEYCVMLVKDATLEPEELGYLIDKKI
DSEQVKKAFLKTLPPKETTQIIKKPEPIVDIPPVIEQIQTTMVQDVQSKPETKKTQRNLF
EF
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtctgaggattggaccgagaagtataggccgaagaccctaaaagacgtcgtcggtaat
ccatctgctaccaacgagatgctatcttgggcaaaatcatgggatatgggaataccggaa
aagaaagccctcatactgatcgggacacctggtgttggaaagaccacctccgctgaagca
cttgccattgatatgggttgggggatagttgagatgaatgcgtccgatcaacggacaggg
gacatcatcagggacattgctgtaaggggcgcaaattcgaatacatttgataacagtgga
aactatctggatgtcaaaaatggtggcagaaaactcattgttctcgatgaggcggacaac
ctattcggttccgtggataagggtgctcttccggcgattaacgagcttatcaagaccacc
aaacaaccggtgatattgatcgtcaatgacttctatgccctttcaaaaaaaagttctgca
ataaaaacagacactatacaaataacatttagaaagccgacctctcgtgccatagttgct
gcccttgctgccattgcaaaaaaggagaacattaccatcgatacaggtgttcttgatagg
atcacatcaaattcaaacggtgatatgcgtgcggccataagggacctggaatccttggga
ttgggaacacagaacatatcatatggatcggcagatcaaatatctgaaagaaatataaaa
aaagatatgtatgctgtcgtagacgcgattttcagaaagaacgaccctggatcggctaga
gcaatgctttcaaaagcagattccgacccagagaccgccatactctgggtggacgaaaac
cttccatatgaatatcgtgagcctggggacctggtcagaggatatgaaaaactatgccgt
gcagatgtttatctaggaagggtgcacagacgtcaatactatagattctgggcttatgcc
agcgatatgatgacgatgggtgttgcaacagcgaggatgaacagtctggtctcacatgaa
agaattcgttttcccatgtatctatctaaaatgtctcattccaagaacacacgtgctctc
aaatattccatttgttacaaattggctgtccttaaccatacatccacaaaaagagtagaa
tttgacatacttcccaacgtaaaacaactatgcaggaattcggaagaatactgtgtaatg
ttagtcaaagatgctacacttgaaccagaagaactcggatatctgatcgataaaaagatc
gattcagaacaagtgaaaaaagcctttttaaagacacttcctccaaaagaaacaacacaa
ataataaaaaaaccagaacctatcgttgatataccccctgtaatagaacagatacaaaca
acgatggtacaggatgtacaatccaaacctgaaaccaaaaaaacacaacgcaacttattt
gaattttaa

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