Candidatus Methanogranum gryphiswaldense: KRP56_04710
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Entry
KRP56_04710 CDS
T08253
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KRP56_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meuz03000
]
KRP56_04710
03021 Transcription machinery [BR:
meuz03021
]
KRP56_04710
Transcription factors [BR:
meuz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
KRP56_04710
Transcription machinery [BR:
meuz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
KRP56_04710
RNA polymerase III system
TFIIIB
KRP56_04710
RNA polymerase I system
SL1/TIF-1B
KRP56_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
UAL08464
LinkDB
All DBs
Position
921606..922145
Genome browser
AA seq
179 aa
AA seq
DB search
MNIENVVASTSLGQELNLNAIEDALDGAEYNPQQFPGLVYRLKEPKTATLLFRSGKVVCT
GAKSLDDVKVAISKVAKDLEKANIKISIEPKIEVQNIVASSDLEQEINLNTVAITLGLEK
VEYEPEQFPGLVYRLDDPKVVVLLFGSGKMVCTGAKVPEDVVRAVDKIAAELRSASLMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgagaatgttgttgcctccacctcgcttggacaagagctcaaccttaatgca
attgaggatgcccttgacggagcagaatacaaccctcagcagttccccggacttgtttac
agattgaaagaacctaaaaccgcaactcttctattcaggagcggaaaggtcgtctgtacc
ggcgcaaaaagccttgacgatgttaaagttgccataagcaaagtagcgaaggaccttgag
aaggccaacatcaagatcagcatcgaacctaagattgaagttcagaatattgtcgcatca
tccgatcttgagcaggagatcaacttaaacacggtcgccataacgctcggactcgaaaag
gtcgaatatgaaccagaacagttccctggactcgtatacaggcttgatgaccccaaggtc
gtcgtacttctcttcggatccggaaagatggtctgcacaggtgccaaagtacctgaagac
gtcgtccgtgccgttgacaagatcgccgcagaacttagatccgcaagcctcatggcctaa
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integrated database retrieval system
