Candidatus Methanogranum gryphiswaldense: KRP56_05770
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Entry
KRP56_05770 CDS
T08253
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meuz03032
]
KRP56_05770
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_05770
Enzymes [BR:
meuz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KRP56_05770
DNA replication proteins [BR:
meuz03032
]
Prokaryotic type
DNA Topoisomerases
KRP56_05770
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KRP56_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Rubredoxin_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UAL07340
LinkDB
All DBs
Position
1132109..1134499
Genome browser
AA seq
796 aa
AA seq
DB search
MRKLIITEKANAARRISTILSDGKTHSESGGGVTVLTFEAEGDDYTVVSLRGHIIELDYP
EEYNDWGSSSPVDLVRAPQVKTVRVKSILNKIGEMTKLSDEIIIATDYDREGELIGMETV
RAVDTDMSKVKRAKFSALTKGEVEKAFSELTDPDTKLSDAAEARQIVDLSWGAVLTRLIS
LSAGQVGKNFMSVGRVQSPTLKLLVERNEEIESFIPVPYWSIVGKFGMLAFRGEHSKNPF
WNEKEAHTILANVTKHTKGTITEYTVTEKEEYRPAPFDTTMMQVEANKIGIPPTMAMKLA
EDLYTSGYISYPRTENTEYPKSLGLKTVLEKLKESSDFKADAEEILKQEKISPSRGKRRT
TDHPPIYPTAGASSDKMKGDKWKLYELIVRRFLATVGPNAKAQITDVVINVDGEEFNSQG
YIQLESGWKKYYKKYIKVTENHLPKMNVGDKIDIRSIGIENSETKPPYRYNQGSLIQEMD
RLQLGTKSTRHDIIGKLYSRNYVQGNYLVPTASGTALTKSLEKHGGGITESEMTARLEED
MLMISEGKYTLEDVVKKSQDMLYDVAVKISTESNDIGNEIKAALRSQQFVGICPSCGKNM
TIKKSKNGNFIGCDGYPDCTRAYPLPKGAMIQTVETLCPICGLSQLKIVRKGMPPSIQCI
DPKCSSNTSKNHLGLCPTCKKGTVRIMYSKTGKRFAGCSEWPNCTQTYPLRPRGTITPTD
ITCEACGAPMIQFGAIAECINPDCTTKKRSARSKTVSTADKNERIGKVVVVKKSSDAKKP
KTTTKKSVVKKSVTEE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaactgatcattacggaaaaggctaacgcagccagaaggatctctactatcctt
tccgatggaaaaacacattctgaatccggtggtggtgtcaccgtcctgaccttcgaagca
gaaggcgacgattacacggtggttagtcttagaggacacattatagaattagattacccc
gaagaatataacgactggggatctagttcccccgtcgatttagtacgtgcaccccaagtc
aaaacagtacgtgtaaagtcgatcctgaacaagatcggcgaaatgaccaagctctcagac
gaaataataatcgctaccgactacgatagagaaggggaacttatcggaatggagaccgtc
agggccgtagacactgatatgtccaaagttaaaagggcaaaattcagcgcattgaccaaa
ggagaagttgaaaaagcattctctgaactgacagaccccgacacaaaactatctgatgcc
gcagaagctagacagatagtggacctctcttggggagctgttctcacaagattgatctcg
ttatccgctggacaagttggtaagaatttcatgtccgtcggaagggtccaaagcccgacc
ctaaaacttctagtcgaaaggaacgaagagattgaaagcttcataccagttccgtattgg
agcattgtcggaaaattcggaatgctagcgttcagaggggagcatagtaagaatcctttt
tggaatgagaaagaagctcacacgatacttgccaatgtaaccaaacacacaaaaggcacc
atcacagaatacactgtcacagaaaaagaagagtatcgtccagcacctttcgatacaacg
atgatgcaggttgaggccaacaaaataggcataccgccgaccatggccatgaaactcgct
gaggacctctacaccagcggatatatctcgtacccgcgtacggaaaacacagaatatccc
aaaagcttaggtcttaagactgtcctcgaaaaattaaaagaatcgtctgatttcaaagcg
gacgcggaagagatcctcaaacaagagaagatctccccttccagaggaaaaagaagaaca
acggaccatccgccaatatatcctacggctggagcatcatccgataaaatgaagggtgac
aagtggaaactttacgaactgatcgtcagaagattcctagccactgtaggacctaatgca
aaagcacagataacagatgttgtaataaatgtggatggcgaagaattcaactcacaaggt
tacatacaattggaatctggatggaaaaaatactacaaaaaatacatcaaggtcacagaa
aaccatttaccaaaaatgaatgtgggggacaaaatcgacattagatcgattggcatcgaa
aactccgagacgaaaccaccctacagatacaatcagggatcgctgatccaagagatggat
agactccaactcggtaccaagagtacaagacacgatatcatcggaaaactctactcgagg
aattatgttcagggaaattatttagtgcccactgcgagtggtactgcacttaccaaatcc
cttgaaaaacatggcggaggcattacagaatccgaaatgaccgctagactcgaagaagac
atgctgatgatcagtgaagggaagtacactctcgaggatgttgtcaaaaaatcccaagac
atgctttacgatgtcgcagtgaagatttccactgaaagcaacgatattggaaatgagatc
aaagcagccttaagaagtcagcaatttgttggtatctgcccatcatgcggtaagaatatg
accattaagaaatctaagaatggcaacttcataggatgcgatggataccctgactgtaca
cgtgcttatcccctgccgaaaggagctatgattcaaacggtagagacattgtgtcctatt
tgcggcctttcacaactaaagattgtacgtaagggcatgccgccctccatacaatgtata
gatccgaaatgcagcagcaatacatcgaagaatcaccttggactgtgtcctacatgcaaa
aaaggcacagtgcgcataatgtattcaaaaacaggaaaacgctttgcaggctgttcagaa
tggccaaactgtactcagacatatcctctgagacccagaggcaccattactcccacagac
ataacatgtgaagcgtgcggagcaccgatgatacagtttggagctattgcagaatgtata
aatccagattgtacaacgaaaaagaggagtgcacgttcaaaaactgtctctacagcagac
aagaatgaacgtatcggcaaagttgttgtggtcaagaaaagctctgacgctaaaaaacct
aaaaccacaacaaaaaaatctgttgttaaaaaatctgtaactgaagaatga
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