Candidatus Methanogranum gryphiswaldense: KRP56_05815
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Entry
KRP56_05815 CDS
T08253
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meuz03016
]
KRP56_05815 (rnz)
Enzymes [BR:
meuz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KRP56_05815 (rnz)
Transfer RNA biogenesis [BR:
meuz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KRP56_05815 (rnz)
Prokaryotic type
KRP56_05815 (rnz)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UAL07346
LinkDB
All DBs
Position
complement(1141196..1142104)
Genome browser
AA seq
302 aa
AA seq
DB search
MLDILFLGTGASLPSRDRSPPCIALRGGSDIILFDCGEGSQRQMMISPFSFMKVTGIFIT
HLHGDHVFGLPGLLQTMGISGRKDPLIVCGPSGFKKALEMMLSVCEGQIDYPLDIRELEA
GDVVGFKDLTVSCFSTMHNIPSLGYVLKEKDQKGKFDKDRAIGFGLKSSDYGKLQDGQEV
NGITPDMVMGPPRPGLKVVYSGDTTSCDQSIDAAIGADLLIHESTYCESESALAAKHFHS
TSKQAALIAKKAECKNLILVHISNRYEDRKVVENEAREIFQDSYIADDLQLYRLNKSGLK
LV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatactgttcctgggtacaggtgccagtttgccctctagggataggtcgcca
ccatgtatcgcactccgtggtggttcggacatcatccttttcgattgcggcgaagggtcg
caacgacagatgatgatctcccccttttccttcatgaaggtaacagggatattcataacg
catctgcacggagatcatgttttcgggctcccagggcttttgcagaccatgggcatctcc
ggcagaaaggacccattgatagtgtgcggtccgtcagggttcaagaaagccttggagatg
atgttgagcgtatgtgaagggcagatagactaccctctggacataagagaactggaagca
ggagatgttgttggattcaaggacctgaccgtttcctgtttctccaccatgcacaacatt
ccttctctgggttatgtcttaaaagagaaggaccagaaaggtaaattcgataaggatagg
gccataggattcggtcttaagtcttcagactatgggaaacttcaagatggtcaggaggtc
aacggcataactccagatatggtcatgggtccgcccaggcctggtttgaaagtagtttat
tccggggataccacatcatgtgatcagtcgatcgatgcagccatcggtgcggatcttctc
atccatgagtccacatattgtgagagcgagagtgcattggcagcaaagcattttcattca
acctccaagcaggcagcgttgatcgcaaaaaaagcagaatgcaagaacctgatcctggta
cacatcagcaatcgttacgaggatcgcaaggtggtggagaatgaggcccgggagatattc
caggattcatatatcgcagacgatcttcaactgtatcgtttgaacaagagtgggctcaaa
ttagtttga
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