Candidatus Methanogranum gryphiswaldense: KRP56_05830
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Entry
KRP56_05830 CDS
T08253
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03030
DNA replication
meuz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRP56_05830 (fen)
03410 Base excision repair
KRP56_05830 (fen)
03450 Non-homologous end-joining
KRP56_05830 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meuz03032
]
KRP56_05830 (fen)
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_05830 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meuz04147
]
KRP56_05830 (fen)
DNA replication proteins [BR:
meuz03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
KRP56_05830 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
KRP56_05830 (fen)
DNA repair and recombination proteins [BR:
meuz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
KRP56_05830 (fen)
Exosome [BR:
meuz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KRP56_05830 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Relaxase_C
HHH_7
Motif
Other DBs
NCBI-ProteinID:
UAL07349
LinkDB
All DBs
Position
1143105..1144133
Genome browser
AA seq
342 aa
AA seq
DB search
MGVNLSGLVEPKTIELSDLRGKTVAIDAYNMIYQFLSIIRQPDGSPLCDKEGRVTSQLSG
ILYRTSNLICQGIEPIFVFDGKPNELKKATLDERKERREKATAEWEEAKEAGDMKKAFSK
AQQTSRMTPEIRGSSKSLIKALGLPMVEAPSDGEAQAAYMCKKGSVYAAASQDFDSLLFG
TPTLVRNMTITGRRKIPGKEMYRDVLTELISTEDFLTSLGITREQLVDMCILMGTDFNEG
ISGIGPKKGLKLVKEMKDLEHILPHLDKEIPEYEEIRTIFLNGEHFDDYQLKPVEIDRAA
VLELMMQYDFSPDRVNGTLDKIENARNDECARKKQRSLDCWF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggagttaacctgtcagggcttgtggagcccaaaacgatagaattatcggatcttcgc
ggtaagaccgtcgcgattgatgcctacaacatgatatatcagttcctttctataatcaga
cagcctgacggcagccctctctgtgacaaagaaggccgcgttacatctcaattatctggc
atcctatacagaacatccaatctcatctgtcaaggcatcgaaccgatatttgtttttgat
ggaaaacccaacgaacttaagaaagccacattagatgaaaggaaagaaagacgtgaaaag
gccactgcggaatgggaagaagccaaagaagcaggcgatatgaaaaaggcattctccaaa
gcacaacagacctccaggatgacaccggagatcagagggtcttcgaagagcctcataaaa
gctctcggcctaccaatggtggaagccccatccgacggagaggcacaggcggcatacatg
tgcaaaaaaggttctgtatatgccgcagcatcacaagatttcgattcgcttctcttcggt
acaccgacactcgtcaggaacatgaccataaccggaaggagaaagatacccggcaaggaa
atgtacagggatgtgttgaccgagctgatatccactgaggatttccttacatctctgggt
ataacaagagaacagttagtggacatgtgcatacttatggggacggatttcaatgaaggt
atctctggaataggtcctaaaaaaggattgaaactggtcaaagaaatgaaagatctggaa
catatactcccacatcttgacaaagagatacccgaatacgaggagatacgcaccatattc
ctgaatggcgaacattttgacgattatcaactcaaacctgtagaaatagacagggcggcc
gtcttagaacttatgatgcaatacgatttctcacctgatagagttaacggaacgctggat
aagatcgaaaacgcccgtaatgatgaatgcgcaagaaaaaaacaaagatcgctggattgc
tggttctga
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