Candidatus Methanogranum gryphiswaldense: KRP56_06035
Help
Entry
KRP56_06035 CDS
T08253
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meuz03016
]
KRP56_06035 (truD)
Enzymes [BR:
meuz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KRP56_06035 (truD)
Transfer RNA biogenesis [BR:
meuz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KRP56_06035 (truD)
Prokaryotic type
KRP56_06035 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UAL07387
LinkDB
All DBs
Position
1182815..1184119
Genome browser
AA seq
434 aa
AA seq
DB search
MQYRYCRTAEANIGMNFYMTSMDGTGGRLKTLPEDFIVTEISDPPEPKENGKFVIAEVTT
RNWETNRLIRLMSRNMGISRERIGFAGTKDKRAITTQLMSFEMPIEKLQDVNLKDVEIKN
AYLGKRNIQIGDLIGNSFKIRVKECDAPPEKIEDTITSVISEIKKMGGFPNYFGVQRFGV
IRPITHIVGESLVRGDIEGAVRRYLSDPSEYEEEDVRNARMELVSRNDWKELVKIMPDQL
SFEKMMVFHLADNPDDWIGAIDVLPKNLQMMFVHAYQSYLFNMMLSKRMEIGLPLNVPVV
GDVVIPLDSNKIPLHENPIISTEKNIDLVTRQVRAGRAYITISLFGSESLLAEGQMGDIE
REIIKKEMIKAEDFIVPGLNHCSSKGSRREIICPIKDIGYELNDDGYSISFSLPKGNYAT
CLMREFMKSEMERY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaggtactgcaggacagctgaggccaacatcggcatgaatttttacatgacg
tcgatggatggcaccggaggacgtctaaagaccctccccgaggatttcatcgttacagag
atatctgatcctccggaaccgaaagagaacggtaaattcgtgatcgctgaggtcactact
aggaattgggagacgaacagactcatcagactcatgtcaaggaacatgggaatatctaga
gaacgcatagggttcgcaggcacgaaggataagagggccataaccacacagttgatgtcc
tttgagatgccgatcgaaaaactccaggacgtgaatctgaaagatgtcgagataaagaat
gcctatctcggaaaaaggaacatccaaataggcgatctcatcggtaattctttcaaaata
cgggtaaaagaatgcgatgcaccccccgaaaagatcgaagacacgataacatctgtgatt
tctgagatcaagaaaatgggaggatttccaaattatttcggggttcaaagatttggagtg
atacgtcccataactcacatcgttggagaatcactcgtacgtggcgatatcgaaggagct
gtcagaagatatctctcagatccgtctgaatatgaggaagaggatgtccgcaatgcgagg
atggaactcgtatcaagaaatgattggaaagaacttgtcaaaataatgccagaccaactg
tctttcgaaaagatgatggtgtttcatcttgccgataaccctgatgattggataggggcc
atagatgtacttccaaaaaatctgcagatgatgttcgttcatgcctatcagtcctatctt
ttcaatatgatgctcagcaaaagaatggaaattggactcccgctcaatgttccagtggtc
ggcgatgtcgttataccattggactccaacaagatacctctgcacgagaaccccatcata
tccacagaaaagaatatagatcttgtaacaagacaagtgcgtgccggacgggcatacata
acaatttcattgttcggcagtgagagcctgctggcagaaggccagatgggagatatagaa
agggagatcatcaaaaaggagatgatcaaagcggaagacttcatagttccgggacttaac
cattgcagttcaaaaggcagcagaagggaaataatctgtcccatcaaagatatcggatat
gagcttaacgacgacggttacagcatatccttctcacttccaaagggcaattatgccaca
tgcctcatgagagaattcatgaaatcagagatggaaagatattga
DBGET
integrated database retrieval system
