Candidatus Methanogranum gryphiswaldense: KRP56_07185
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Entry
KRP56_07185 CDS
T08253
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRP56_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meuz03400
]
KRP56_07185
Enzymes [BR:
meuz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KRP56_07185
DNA repair and recombination proteins [BR:
meuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KRP56_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UAL07583
LinkDB
All DBs
Position
1384939..1385985
Genome browser
AA seq
348 aa
AA seq
DB search
MIRFGPAGIPLSCKGRTLKDGVEDVHNLSLTALEIQMVRANAYKRYPEEEEVGLTMKDIT
EGFVVEVYRDGEALMPDEEIADEDELVFMPSGITDFFGELYEVGHMAKRLDVGLSLHTPY
YMDLGSNSELTNVCMDSIRHAGLIVDALDGEVVVTNLGLYTGKIPDEEIDANIYSNVADL
MEWWQGMNLKPKLGVEITGQRSVFGSLDQVLDLCSEIDGVVPVINFPHYHSRTEGSLLEV
DDFADIIKQVEPYYGKDNIHTAFAGVEHEGGYEKRLTPIKKGDLKFEPLAEALCEVQPSA
TIISSSPLLEHDAMYMRIINERVLSKRVAKQIKERKKAEAAATASPEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgataagattcggacccgccggaataccgctgtcctgtaaaggacgcacacttaaagac
ggtgtagaggacgtccataacctcagcctaactgcactagagatacagatggtaagggcg
aacgcctacaagaggtatcctgaagaagaagaagtgggcctcacgatgaaggatattacg
gaaggctttgtcgtggaagtctatagagatggagaagccttaatgccagatgaagaaatt
gcagacgaggatgaactcgtcttcatgccgtctggaatcacagatttctttggagagctt
tacgaagttggccatatggccaaaagattggatgttggcctgtccctacatactccttat
tacatggacctcggttcgaattcagaattaacaaacgtatgcatggattccataagacat
gcaggacttatcgttgacgctcttgacggagaggtcgttgttaccaatctgggactatat
actggaaagatacctgatgaagagatagatgccaacatatacagtaatgttgcagatctt
atggaatggtggcaaggcatgaacctcaaaccaaagctcggtgtggaaataaccggacaa
agatctgtatttggatctcttgatcaggttctggacctatgttcggaaatagatggggtc
gttcctgttatcaatttccctcactaccattcacgcacagaagggtcacttctggaagtg
gatgattttgcagatattatcaaacaagttgaaccttactatggtaaagacaacattcat
acagcattcgctggtgtagaacacgaaggtggctacgaaaaaagactcacccctatcaaa
aagggagacctcaaattcgagcctctcgctgaagcactctgtgaagtacaaccgagtgcg
accattatctcaagctctcctctactggaacatgatgccatgtacatgaggatcataaat
gagagggtcctcagcaagagagttgcaaaacagatcaaagagaggaaaaaggcggaggcg
gctgctaccgcatctccagaggcgtga
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