Candidatus Methanogranum gryphiswaldense: KRP56_07275
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Entry
KRP56_07275 CDS
T08253
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz00300
Lysine biosynthesis
meuz00470
D-Amino acid metabolism
meuz01100
Metabolic pathways
meuz01110
Biosynthesis of secondary metabolites
meuz01120
Microbial metabolism in diverse environments
meuz01230
Biosynthesis of amino acids
Module
meuz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KRP56_07275 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KRP56_07275 (lysA)
Enzymes [BR:
meuz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KRP56_07275 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UAL07598
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All DBs
Position
1400027..1401283
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AA seq
418 aa
AA seq
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MRDFEGKSGIMMFGGMPVTEIADKFGTPVYVTDEQMLRENYRNLYGAFSKYMNTKIHYAC
KANTSLAILSILNQEGCGIDAVSVGEVMTCIKAGIPPERIMYTGVNVSNAELKAVTDMGV
MINVDSRSELERLSKINKNLPISFRVTPGVGSGHSDKVITGKKGSKFGIPKEEVIQTYLR
AKELGFNIKGIHAHIGSGGQSVEPFMEMMDVLTDTVNELKENGIELEFIDMGGGIGVPYR
MNEEEMDLDELAMNVTDIITENTDIKTIILEPGRYIICDSTILLTRCVDVKDAGTKKYIG
VDAGFNTLIRPAMYDSYHYVAIGNRFGKAATDKYDIAGPICESGDFLAHDRALPTPEEGD
VVVVYNAGAYGFTMSSNYNSRPLCAEVLVNNGKADLIREKETVEEQWRHQIIPKRLIK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagggatttcgaaggaaagagcggaatcatgatgttcggcggaatgccagtaacagaa
atcgctgataagttcggcacgccagtatacgtcaccgacgaacagatgctcagagagaac
tataggaatctatacggtgcattctcgaaatacatgaacaccaagatacattatgcctgc
aaggctaacaccagtttggccatactaagcatattgaatcaagaaggctgtggcattgat
gcggtgtctgtaggagaggttatgacctgcatcaaagcaggaattccccctgagcgcata
atgtacactggtgtaaacgtaagtaacgccgaactcaaagccgtaaccgacatgggtgtg
atgataaacgtcgattccagatctgaattggaaagactgtcgaagatcaacaaaaacctc
cccatctcattccgtgtgaccccgggggttggctctggacacagtgataaggtcataaca
ggcaaaaaaggctccaaattcggaatacccaaggaagaggtcatacaaacatacctcaga
gcaaaggaacttggattcaatatcaaaggcatacatgcacacatcggctccggaggacaa
tcggtagaacccttcatggaaatgatggatgtgcttaccgataccgtgaacgaactgaag
gagaacggcatagaactggagttcatagacatgggcggaggcatcggcgtcccctataga
atgaatgaggaagagatggacctcgatgaactggccatgaatgtgaccgatatcataacc
gagaacaccgatatcaagacgatcatcctagagcccggaagatacatcatatgtgattcc
accatacttctaacaaggtgtgtcgacgtcaaggatgcggggaccaagaaatacatcggc
gtggacgctggcttcaacacgctcatccgtccggcaatgtatgattcctatcactacgtc
gccatagggaacagattcggaaaagcggcgaccgataaatacgatatcgccgggcccata
tgcgaatctggggacttccttgcacatgacagggcactgcctacacccgaggaaggagat
gtcgttgtcgtgtacaatgcgggagcgtatggattcaccatgtcaagcaactataattcg
agacctctctgtgcagaagtgctggtaaacaacggcaaggcggatctcatacgcgaaaag
gagaccgtcgaagaacagtggagacaccagattatacccaagaggctcataaaatga
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