Methanohalobium evestigatum: Metev_0599
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Entry
Metev_0599 CDS
T01261
Name
(GenBank) exosome complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
mev
Methanohalobium evestigatum
Pathway
mev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Metev_0599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mev03019
]
Metev_0599
Messenger RNA biogenesis [BR:
mev03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Metev_0599
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Metev_0599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ADI73507
UniProt:
D7E8G5
LinkDB
All DBs
Position
complement(586958..587959)
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AA seq
333 aa
AA seq
DB search
MNNEPTKFIDENGLRVDGRRTDEIRPMKVDIGVLSRADGSCYLEWGNNKIISAVYGPREL
HPRRMQRPDAAVIRYKYNMASFSVEDRQRPGPSRRSSEISKVSSEAFEPVVMTQFYPNTV
IDVFSEVLEADAGTRTAAINAATLALIDAGIPLKSLVSACAVGKVDGQLVLDLNKKEDNE
GEADLPVAITQDGEITLLQMDGHLTEDEIKQAMELVKNGCQQIQQIQREALLKKFGQYEG
ADTEIQSVPLTETSSKQETESVDTESSELISSNILSDESSENQEESGEEQEPDTLDILED
ETEQSEDNEDDSDEEDFFVEIVRNNTEGESDDQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaaccaacaaagtttattgatgaaaacggtttacgtgttgatggcagacgt
accgatgaaatcagaccgatgaaagttgatataggtgttttgtccagagctgatggctct
tgttaccttgaatggggcaataataaaataatttctgcagtctatggacccagagagtta
catcccaggcgtatgcagcgccctgatgcagcagtcatacgctacaaatacaatatggct
tctttttctgtagaggatagacagcgtccgggaccaagtcgtcgaagtagtgaaatatcc
aaggttagtagcgaggcttttgaacctgttgtcatgacacaattttatcccaacactgtt
attgatgttttttccgaagtacttgaagcagatgcgggtacaaggactgctgccattaat
gctgcaacacttgctttaatagatgcagggataccactgaaaagtttggtatcagcctgt
gcagtgggaaaagttgatggtcagcttgtgctggatttaaataaaaaagaggataatgaa
ggagaagcagacctgccagttgcaataacccaagatggagaaattacactgcttcaaatg
gacggacacctgactgaagatgaaattaaacaggcaatggaacttgttaaaaacggttgc
caacagattcagcaaattcaaagggaagcactccttaaaaaatttggtcaatatgagggg
gcagatactgaaatacaatctgtacctttgactgaaacatcttctaaacaggagactgaa
tctgttgatacagaaagcagtgaattaatttccagtaatatcctttctgatgaatcctct
gaaaaccaggaagaatccggagaagaacaggaaccagacacattagatatccttgaagat
gaaaccgaacaatctgaagataatgaggatgattcggatgaagaggatttttttgtggaa
attgtgagaaataatacagaaggtgaatcagatgaccagtga
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