Methanobacterium paludis: MSWAN_0088
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Entry
MSWAN_0088 CDS
T01509
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mew
Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mew03016
]
MSWAN_0088
Enzymes [BR:
mew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSWAN_0088
Transfer RNA biogenesis [BR:
mew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWAN_0088
Prokaryotic type
MSWAN_0088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEG17135
UniProt:
F6D7Q6
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All DBs
Position
107299..108552
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AA seq
417 aa
AA seq
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MLNAETYVTEDKGLSGKIRTKYEDFYVEEIPENLPSGTGPNTWIFIEKIGRNTLDVVLDI
AKEMHINRKRTGFAGMKDKAAVTRQWLCVSNIEPEELPDLEEKLYNVKVLKIMKNEKKLR
IGQLVGNKFRILIRDSEDPKQDAETAGRILDQLVQNGVPNYYGWQRFGKNRPNTHKVGEA
LVHNDIKGAVDSYIGNPYEKEKDHIKEARALYDIGEFEEAYQSMPSGMRYEKMMLRELMK
QQRKRGKLDEEAYKISLESLPKPLKRMFVHAYQSYLFNKAVSERTKMGIDRYVEGDIVID
NEEHLIHEFEEEDINEKIRNFQAHQTAPLYGTKVPLAGAEVGKMEQKVLDEEGIKLEDFE
CPKTPRLGSHGLRRAIRFKIWDVKAECTDEGVMVEFSIPKGCYATAVIREIMKEDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgctgaaacatatgtaacggaagataaaggtttaagtgggaagataaggact
aaatacgaggatttctacgtggaagaaatacctgaaaacctgcctagtggtacaggcccc
aacacatggatattcatagaaaagatcggtagaaacacccttgatgtggtattggacatt
gcaaaggagatgcacatcaaccgtaagagaacgggctttgcaggtatgaaggacaaggca
gctgtaacaaggcagtggctctgtgtaagtaacatagaacccgaggaacttccagacctt
gaagaaaagctttataacgtcaaagtacttaaaataatgaaaaatgagaagaaactgagg
ataggacagcttgtaggcaataagttcaggattttgatcagggactcggaggatccgaag
caggatgcagagactgcagggaggatactggaccagttggtacaaaatggtgtcccaaat
tattatggatggcaacgatttggaaaaaaccgcccaaatactcataaagttggagaagca
ctggtgcacaacgatataaaaggagcagtagattcttatattggaaacccctacgagaaa
gagaaggaccatataaaagaggcaagggcactctatgatataggagaatttgaagaggcc
taccagagcatgccatcgggaatgcgctacgagaagatgatgcttagggagctcatgaaa
cagcagaggaaaaggggcaaactggatgaggaagcatataaaatctcacttgaaagcctt
ccaaaacctttaaaacgaatgtttgtccacgcgtatcaatcatacctattcaataaggcg
gtaagtgaaagaacgaagatgggtattgacagatacgttgaaggtgacatagtcatcgac
aacgaagagcatttgatacatgaatttgaagaagaggacataaatgagaaaataaggaac
ttccaggcccatcagacagccccactttacggaacaaaggtgccccttgcaggtgctgaa
gttgggaagatggaacagaaggtgcttgacgaggaaggcattaagcttgaagactttgaa
tgtcctaaaacccctagacttggaagccacggacttcgaagagctataagatttaaaata
tgggatgttaaagcagaatgtaccgatgaaggtgttatggtggaattttccattccaaaa
gggtgctatgcaaccgcagtgatcagggagatcatgaaggaggatgtttattaa
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