Methanobacterium paludis: MSWAN_0231
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Entry
MSWAN_0231 CDS
T01509
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mew
Methanobacterium paludis
Pathway
mew03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWAN_0231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mew03021
]
MSWAN_0231
Enzymes [BR:
mew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWAN_0231
Transcription machinery [BR:
mew03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWAN_0231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zf_2nd_IFT121
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AEG17277
UniProt:
F6D1Y8
LinkDB
All DBs
Position
264174..265985
Genome browser
AA seq
603 aa
AA seq
DB search
MKKSKIYINGKIIGTCDDPLDFVETMRQKRRAGEVSHEMNITYYPGTNEIYIFTDPGRTR
RPLIVVEDGESKLKEEHIKKIEDGELDWNGLINSGIIEYVDAEEEENSYIAMFEDDITEN
HTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYVSNYNMRTDTRAHLLH
QPQVPLVKTRSIDATKYDKRPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFR
SYEASERRYPGGQEDKFEVPENIVRGYRSEEVYKHLDEDGIVNPEVEVKSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEHGVVDAVLLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENVPFTEEGVVPDLIVNPHAIPSRMSVGQVLEMLAGKAGAM
EGKRMDGTPFGGKQEAEIMELLKQNGFETAGRESLYNGITGERVEAEIFVGVAFYQKLHH
MTADKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEAIVCNECGMIAIYDRIRDKRYCSICGDSETFPVEISYAFKLLLDELKSLCIFPKLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatccaagatatatattaatggtaagatcatcgggacatgtgatgatccactg
gactttgttgaaaccatgaggcagaaacgaagggctggagaagtttcccatgagatgaac
ataacctactaccctggaacaaacgagatctacatatttacagatcctggaagaacaaga
agacctcttattgttgtagaagatggggaatcaaagctcaaagaagagcacatcaaaaag
atagaagacggcgaactggattggaatgggctcataaatagtggaataattgaatatgtg
gatgcagaagaggaagaaaattcatacatagccatgttcgaggatgacattacagaaaac
cacacacaccttgagatagacccatcaaccatgctaggaatctgtgctggtatcatacct
tttgcaaaccataactcctcaccaaggaacaccatggaagcaggtatgaccaaacaggca
cttggtctttacgtttcaaactacaacatgaggacagatacacgtgcacatttactgcac
caacctcaagttccattagttaaaacaagaagtatagatgccacaaagtacgataaaaga
ccttcaggtcagaacttcgttgtggctgttatgtcctacgagggatacaacatggaagac
gccctcatccttaacaaagcatcacttgaaaggggacttgcaaggtcatcatttttcaga
tcatacgaagcctcagaaagacgttatcctggaggacaggaagataagtttgaggtgcca
gagaacatagttcgaggttacaggtcagaagaagtttataaacatcttgatgaagatgga
atcgttaaccctgaagttgaagtgaaatcaggtgacgtactcataggtaaaacttcacca
ccaaggttccttgaggaaatagacgagttcggaaccgttgcagaaagaaggcgtgaaact
tcagttacggtgagacacggtgaacatggtgtagtcgatgctgtgttactcacagaaaca
gttgaaggaagtaagctcgctaaaataagggtaagagatcagagacagccagaatttggt
gataaatttgcatcaaggcacggtcagaaaggtgttgtggggctcatagtttcacaggaa
aatgtacccttcacagaagaaggagtagttccagatctcatagtaaatcctcacgctatt
ccatcaaggatgtcagttggacaggtgcttgagatgcttgctggtaaagcaggtgccatg
gaaggaaaacgaatggacggtacaccattcggtggaaaacaagaagcggaaataatggaa
cttctaaaacagaacggattcgaaacagccggccgtgaatcactctacaatggaataacc
ggtgaaagagtagaagctgaaatatttgtaggagttgctttctaccagaaactgcaccac
atgactgcagacaaagtttatgcaaggtcaagagggcctgtacaggtacttacacgtcag
ccaacagaaggaagagcaagagaaggtggtttaaggtttggtgagatggaaagagactgt
ctcatagctcatggagcagctttagcacttaaagagaggcttcttgatgaatctgataaa
tatgaagccatagtatgcaatgaatgtggaatgattgccatctatgacaggataagggat
aagagatactgttcaatctgtggagattctgaaactttcccagttgaaatttcatacgca
ttcaaacttttactcgatgaactcaagagcctttgcatattcccaaaactggttcttgaa
gacaaggcatga
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