Methanobacterium paludis: MSWAN_0404
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Entry
MSWAN_0404 CDS
T01509
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mew
Methanobacterium paludis
Pathway
mew03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSWAN_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mew03021
]
MSWAN_0404
Transcription machinery [BR:
mew03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSWAN_0404
Prokaryotic type
Archaeal type
TFE
MSWAN_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
HTH_Cmi2_C
Rrf2
Zn_Ribbon_TF
HypA
DUF7342
HTH_40
IBR
Sigma70_r3
Zn_ribbon_10
Motif
Other DBs
NCBI-ProteinID:
AEG17446
UniProt:
F6D3M9
LinkDB
All DBs
Position
445350..445907
Genome browser
AA seq
185 aa
AA seq
DB search
MLNVNSPMIQDLIRFSQGKGGAEMLADPTVQEILVDITGDEENSVLIIGCMLKGKTTDEE
IAEETEIKLNIVRRILYKLYDAGVASYKRSKDPETQWYTYSWKFDEEKVAEIIAKKYEKF
SKEIEESLEFEEGNMFFVCLSNGCRYKFEEASENNFICPKCGGSLEYKDNSAVVTELREL
KEKIS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtaaatagccctatgatccaggatttaattaggttttcacaaggcaaaggg
ggagctgaaatgcttgcggaccctacagtccaggaaattctggtggatatcacaggtgat
gaagaaaacagtgttttaatcattggatgtatgttaaagggtaaaacaaccgatgaggaa
attgcagaagaaactgaaattaaactcaacatcgtaagaaggattttatacaaactttac
gatgcaggagttgcaagctacaaaagaagtaaagaccctgaaacacagtggtacacttac
agctggaaatttgatgaagaaaaagtagcagaaatcatagcaaagaaatatgagaaattt
tcaaaggaaattgaagaatccttagaatttgaagaagggaacatgttctttgtttgttta
agcaatggatgcagatacaaatttgaagaagcatctgaaaacaatttcatatgtccaaaa
tgtggtggctcacttgaatacaaagataattctgctgtagtaacagaattaagagaatta
aaggaaaagataagctaa
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