KEGG   Methanobacterium paludis: MSWAN_0404
Entry
MSWAN_0404        CDS       T01509                                 
Name
(GenBank) Transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mew  Methanobacterium paludis
Pathway
mew03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSWAN_0404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mew03021]
    MSWAN_0404
Transcription machinery [BR:mew03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSWAN_0404
 Prokaryotic type
  Archaeal type
    TFE
     MSWAN_0404
SSDB
Motif
Pfam: TFIIE_alpha Rad50_zn_hook HTH_Cmi2_C Rrf2 Zn_Ribbon_TF HypA DUF7342 HTH_40 IBR Sigma70_r3 Zn_ribbon_10
Other DBs
NCBI-ProteinID: AEG17446
UniProt: F6D3M9
LinkDB
Position
445350..445907
AA seq 185 aa
MLNVNSPMIQDLIRFSQGKGGAEMLADPTVQEILVDITGDEENSVLIIGCMLKGKTTDEE
IAEETEIKLNIVRRILYKLYDAGVASYKRSKDPETQWYTYSWKFDEEKVAEIIAKKYEKF
SKEIEESLEFEEGNMFFVCLSNGCRYKFEEASENNFICPKCGGSLEYKDNSAVVTELREL
KEKIS
NT seq 558 nt   +upstreamnt  +downstreamnt
atgctcaatgtaaatagccctatgatccaggatttaattaggttttcacaaggcaaaggg
ggagctgaaatgcttgcggaccctacagtccaggaaattctggtggatatcacaggtgat
gaagaaaacagtgttttaatcattggatgtatgttaaagggtaaaacaaccgatgaggaa
attgcagaagaaactgaaattaaactcaacatcgtaagaaggattttatacaaactttac
gatgcaggagttgcaagctacaaaagaagtaaagaccctgaaacacagtggtacacttac
agctggaaatttgatgaagaaaaagtagcagaaatcatagcaaagaaatatgagaaattt
tcaaaggaaattgaagaatccttagaatttgaagaagggaacatgttctttgtttgttta
agcaatggatgcagatacaaatttgaagaagcatctgaaaacaatttcatatgtccaaaa
tgtggtggctcacttgaatacaaagataattctgctgtagtaacagaattaagagaatta
aaggaaaagataagctaa

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