Methanobacterium paludis: MSWAN_0441
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Entry
MSWAN_0441 CDS
T01509
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mew
Methanobacterium paludis
Pathway
mew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSWAN_0441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mew03019
]
MSWAN_0441
03009 Ribosome biogenesis [BR:
mew03009
]
MSWAN_0441
Enzymes [BR:
mew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSWAN_0441
Messenger RNA biogenesis [BR:
mew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSWAN_0441
Ribosome biogenesis [BR:
mew03009
]
Prokaryotic type
rRNA helicases
MSWAN_0441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Fe_hydrogense_Fe-S_bd
Glycos_trans_3N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEG17481
UniProt:
F6D459
LinkDB
All DBs
Position
491703..493295
Genome browser
AA seq
530 aa
AA seq
DB search
MKKLRFKDLDISSEIENAVADMGFEEATPIQSLAIPHVLDGRDVIGQAQTGTGKTAAFGI
PILEMVDPGDRSLQAVILCPTRELAIQVAEEIRKLSKYMSKIKVLPIYGGQPIERQIKAL
KKGVQVIIGTPGRVMDHMRRGTLKMDSVKIMVLDEADEMLDMGFRDDIEIVLRDMPSERQ
TLLFSATMSRDILNLTRKYQNNPEFLKVVHQELTVPEIQQIYFEVKEKMKLELLSRLLDI
HNFKLSLVFCNTKRRVDKLVTHLQIRGYAADGLHGDMTQSQRDRVMAKFRNGKIEVLVAT
DVAARGIDVENVEAVFNYDVPNDDEYYVHRIGRTGRAGKTGMAFTFVSGKEIYQLRDIQK
YTKTKIEQHQIPSIKDVEAIKTNNFLENVKHVINTEDLEKQVHLIEKMMEEDYSSVEMAA
ALLKIVMTRETSDVKVESASNDFGDTGASPGMVRFFINVGRKQKIRAKDIIKAINDKTGL
TSSSIGKVDVFDKFSFVEVPEASAGEVLSSVSGSRIKGKSVNMEPANKRE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttagatttaaagatttagatatatccagtgaaatagagaacgctgttgca
gatatgggatttgaagaagccacaccaattcaatctttagcaatacctcacgtactggat
ggaagagatgttataggccaagcacagacaggtacaggaaaaacagccgcatttggaatt
ccgattctagaaatggttgatcctggcgacagaagtctgcaagccgtgatactctgccca
acaagggaacttgcaattcaggttgcagaagaaatcaggaagctctcaaagtacatgagt
aaaatcaaagtactgccaatttacggcggccagccgatagagagacagataaaagccctt
aaaaaaggtgtacaagttataataggcactccaggtcgtgttatggaccacatgaggaga
ggaaccctgaaaatggattcagtgaaaatcatggttctggatgaagctgatgaaatgctt
gacatgggattccgagatgatattgaaattgttttaagggatatgccctctgaaaggcag
actcttcttttctctgcaacaatgtcccgggacatacttaatttaacccgtaaataccag
aataaccctgaattccttaaggtagtccatcaggaactcacggtacccgagatccagcag
atctactttgaagttaaagagaaaatgaaacttgaacttctatcacgtttactggacata
cacaacttcaaattatcacttgttttctgtaacaccaaaagaagagttgacaaacttgta
acacatctccagataagaggatatgctgcagacggactccatggagacatgacccaaagt
cagagggacagagttatggccaagtttagaaacggtaagatcgaagtcctggttgcaaca
gatgtggctgcaaggggaatcgatgtagaaaatgttgaagcagttttcaactatgacgtg
ccaaacgacgatgaatactatgttcacaggattggaagaacaggtagagcaggtaaaaca
ggtatggcattcactttcgtatctggaaaagaaatctaccagcttagagatatacagaaa
tacaccaaaaccaagatagaacagcatcagataccatccatcaaggatgttgaagcgatc
aagaccaacaacttccttgaaaatgttaaacatgttataaacacagaagatctggaaaaa
caggttcatcttattgaaaagatgatggaagaagattacagctccgtggaaatggcagca
gcacttcttaaaattgtcatgaccagggaaaccagtgatgttaaagtggaatccgcgtct
aacgacttcggtgacacaggagcaagtccaggtatggtaagatttttcatcaatgtgggc
cgtaaacagaagatcagagcaaaagatataataaaagctataaatgacaaaacaggtctt
acaagctcatcaataggtaaagtggatgtttttgacaagttctcttttgtagaagttcct
gaagccagtgcaggtgaagttctttcttcagtaagtggatctagaataaaaggtaaatct
gtgaatatggaacctgcaaataaaagggaataa
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