Methanobacterium paludis: MSWAN_0491
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Entry
MSWAN_0491 CDS
T01509
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mew
Methanobacterium paludis
Pathway
mew03410
Base excision repair
mew03430
Mismatch repair
mew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSWAN_0491
03430 Mismatch repair
MSWAN_0491
03440 Homologous recombination
MSWAN_0491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mew03400
]
MSWAN_0491
DNA repair and recombination proteins [BR:
mew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSWAN_0491
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSWAN_0491
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSWAN_0491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AEG17530
UniProt:
F6D4P5
LinkDB
All DBs
Position
complement(532048..533451)
Genome browser
AA seq
467 aa
AA seq
DB search
MVESQENPMNKALSKAHEMVEKAEDIKIYSHIDCDGITAGSLLSLMLDRLGKEHEIEFIS
LDKIDDLKTTNELTIFSDLGSGQNLDKFCTSSSKVLVLDHHPPLREMNHYKKCEFLEINP
HFYNMDGSYEISGGGMTYLLAKTFGFYDLSWMGVLSAVGDMQNSLTGKLQGLNQDILTDS
VQNNFVESINDLSIYGRQTRPLFVALSYFGDVNLPITNNKTECILMLNKLGIPTKNGRKN
RSLCDLSVEEKSTLFSELVRMLSREVPPKYVRYIPKLICGDSYEFLNEKKYSPLRDASEF
STAVNACSRHEHPEIAMRVLKGDRALALDDMDDLAREHKRYLAQKMDWVREEERIIPMNN
IQYFNGSEIKSNVIGTIAGMILSYGDWKKPIIGFTEIGDGKDGLKVSLRCSRLLAYNGVH
FGNLIRKVAEKVGGTGGGHSVACGAYIPEGSTEAFLNIFDESLNGMI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagagtcaggaaaatccaatgaacaaagccctttcaaaagcccatgaaatggtt
gaaaaagccgaggacatcaaaatatacagccacatagactgcgacggcataactgcaggg
tctttattgtcattaatgctggacagacttggaaaagaacatgaaatcgaattcataagt
ttagataagatagacgatcttaaaactaccaatgaacttaccatattctctgatctcggt
tctggacaaaatttagataaattttgcacttcttcatccaaagttctggttttagaccac
catcctccattaagggaaatgaaccactacaaaaaatgtgaatttcttgagataaacccc
catttctacaatatggatggatcatacgagatttcaggcggcggaatgacatacctactc
gctaaaacatttggattttatgatttaagctggatgggtgttttaagcgctgttggagac
atgcaaaatagtttaaccgggaaactacagggtttgaatcaggacatactcacagatagt
gttcagaacaactttgtagaatcaataaatgacctttcaatctatggaaggcaaacaaga
cctttatttgtagctttatcttattttggagatgtaaatcttccaataacaaataataaa
actgaatgtattttaatgttgaacaaactgggcattccaacaaaaaacggtagaaaaaac
agatctttatgcgatttaagtgttgaagagaaaagtacgttattctccgagctcgtgaga
atgttaagcagggaagttccaccaaaatacgtgcggtatattccaaaacttatttgcgga
gattcttatgaatttttaaatgagaaaaaatattccccattaagggatgccagtgaattc
tcaactgccgtgaatgcatgcagtcgccatgaacatcctgaaatcgccatgagagttttg
aagggagatagagctcttgcactggacgatatggatgatttagcacgtgaacacaagagg
tatctcgcccaaaaaatggattgggtccgggaagaggaaaggatcattccaatgaacaac
atccagtacttcaacggcagcgaaataaaaagcaacgttataggaactatagcaggtatg
atcctaagttatggggactggaaaaaacccataataggtttcacagaaattggagatgga
aaagacggattgaaagtgtcgttgagatgttcacgcctccttgcctacaacggagtacat
ttcgggaatttaatacgaaaagtagccgaaaaggtaggaggcaccggtggaggccattca
gtagcctgtggagcttacatacctgaaggcagtaccgaagcattcttgaacatctttgat
gaaagcttgaacggaatgatctaa
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