Methanobacterium paludis: MSWAN_0560
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Entry
MSWAN_0560 CDS
T01509
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mew
Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mew03400
]
MSWAN_0560
DNA repair and recombination proteins [BR:
mew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSWAN_0560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
AAA_10
T4SS-DNA_transf
FtsK_SpoIIIE
TrwB_AAD_bind
WEF-hand
Motif
Other DBs
NCBI-ProteinID:
AEG17598
UniProt:
F6D563
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All DBs
Position
602026..603570
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AA seq
514 aa
AA seq
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MKEVIGRCIGETTLGYVSFVSKEMPKVGEYVSLNYDNKNVLGMIEALVRGSVSINDDIYD
PKTIERIREIEGDDHYVKGKVRILGDIDNDLRIPRTPAPPGTEIKTADCEVLKEIFHVDK
YGLKLGNLITQEEVEIEVDINKMVTRHLAVLAMTGAGKSNTVSVIVDGLLKVNGSVLICD
MHSEYVNTEFGEDKVNIIKPEINPLYLSFSEIKKLSNIPPNAYVQERYFRKAYKLAKKTL
MKGSRGKDFIALILSQLESWILEVDADSSEDKSNSSVNASDRKSITDVLNKIEHMHEMYG
NILNMEARDIIDNLEIGKANILDLGAVDEFASDVVVSHVLRNVLSSRKEFLRTKDGLSFP
IFSIIEEAHILAPQNRKTESKNWISRIAREGRKFGVGLCLVSQSPKSLDSDALSQANNMI
ILRLVEPTDQSHVQRASESLSDDLISQLPSLNIGEAIVLGLMTRIPTLVKIDEFKGKISG
GDLNIVEEWSRSLKHKKEILEEQKKEYEDLGGDY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtcattggaaggtgtataggagagactacacttggttatgtaagcttcgtc
tccaaggaaatgcccaaagttggggaatatgtttcattaaattatgataataaaaatgtc
ctgggaatgatagaagcccttgttaggggcagtgtttcaatcaatgatgatatttacgac
cccaaaaccattgagaggataagagaaattgaaggagacgaccattacgtaaaaggaaag
gtcagaattcttggggacatagacaacgatctcagaattccacggacaccagcacctcct
ggaactgaaataaaaacagctgattgcgaggttctaaaagagatatttcatgttgataaa
tacggtttgaaacttggaaacctcataacacaggaagaagttgaaatagaagttgacata
aacaaaatggtgacgcgacacttggctgttttagcaatgaccggtgcaggaaaatcaaac
acggtttcggtcattgtagatgggcttttaaaagttaatggaagtgtattaatatgcgac
atgcattctgagtatgttaacacggagtttggtgaagataaggttaacataataaagcca
gagatcaaccccctctacctttctttttctgaaatcaaaaagctgtccaacataccacca
aacgcctacgtccaggagagatactttagaaaagcctataaattggccaaaaaaacttta
atgaaaggttcaaggggaaaagatttcatagctttaatattaagccagcttgaatcgtgg
attttagaagtggacgctgattcatctgaagataaatcaaattcatctgttaatgcttcc
gacagaaaatccataaccgatgttttaaacaagatagaacacatgcatgagatgtacggg
aacatcctgaacatggaagcaagggacattatagacaaccttgaaattggtaaagccaac
atactggatctgggtgcagttgacgagtttgcatcagatgttgttgtaagccacgttctt
cgaaacgttttaagtagtagaaaagaatttttaagaactaaagatggtctttcatttcca
atattttcaataattgaggaagcccatattttagcccctcaaaacagaaaaacggagtct
aaaaactggataagcaggatagcaagggagggccgtaaatttggagttggactttgcttg
gtcagccagagcccaaaatcactggattccgatgctctttcacaggcaaacaacatgata
atcctcagactggtggagcccacagaccagagccatgtacagagggccagtgaaagcctc
agtgacgacctaatatcacagctgccatcgctcaacataggagaagcaattgtattgggg
ctgatgacaaggatacccaccttggtcaagatagatgaattcaagggcaagatatctgga
ggagacctcaacatcgttgaggaatggtccagatccctaaaacataagaaagaaattctt
gaagagcagaaaaaggagtatgaggatcttgggggagattattga
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