Methanobacterium paludis: MSWAN_0562
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Entry
MSWAN_0562 CDS
T01509
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mew
Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mew03400
]
MSWAN_0562
DNA repair and recombination proteins [BR:
mew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSWAN_0562
Archaeal homologous recombinant proteins
MSWAN_0562
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_27
AAA_15
SbcC_Walker_B
Rad50_zn_hook
AAA_29
DUF4407
DUF7491
Baculo_PEP_C
Sec20
DUF1664
HmpF
FliD_N
ABC_tran
Spectrin_5
MukB
Motif
Other DBs
NCBI-ProteinID:
AEG17600
UniProt:
F6D565
LinkDB
All DBs
Position
604705..607407
Genome browser
AA seq
900 aa
AA seq
DB search
MIIESLTMKNFKSHRDTHIDFSTGISVIMGENGAGKSSILEAVSFALFKQHSGKKIEQLI
KIGQKKKMVVDLQFQTNGRTYLVSRERDKSSSKSVLKIKEGNNFQTILSGEKQVTNEIQN
MLDMDGDLFLNAVYVRQGEIADLIDKAPSEKKQMIGKLLGIESLEKTWKNMLPLINNYEI
KKENITGRLESMDGLKENLKSKIIEKDDISSKIQILNVQIDKMGPEFELMKEKKELLDEK
RSEFKRIKSAIESKKQLLNRAENDKNVLNNEIRTIKDKEAAILSIKPKIVSLDILHQLKD
VSRSLKNLQEDEKRIQKGLKDIQKFKSILDENHKFYRDYLDIGDTIKLLEDERLKFEGSR
TLMEQCTSQKSQVQDKIQGSTEKIVKGLKAANKVLRTDFSRVEELENHIKSIKPSTEAKV
EEIRSKINGVQQEISNLKTHNKNLEKPVKELENVKDKCPVCKSTISPDKRDELIEGYDCE
IKSNKDRIFQLDHELKGLKSQKHVLTSKFAEIQNINVDILKERIKTLEQSQKELESISSD
LEGLEPKVSKLNEIDSLLKEKKTNQNEIKGKYESYISVKGSLESLGDYNSKNEDLKKIQT
EIMSLNVNVHQLTEKSGTNLKNLESKILELENLKSEYNHLSGEISQKNSLIEKLDLLDKD
ITGIKEETVKLDNELESIGYNEDIHSSLQMNLYNKSQELTDLIGQKKELIGKESGILDRI
KELESEVEVYGKYKGELRNLKDFIKLLNHIRDLYGKDGVQRDLRNISRPLIEQNTREFFE
KFNFEYSDIKLDEDYDVTVYGPAGKNSLDMISGGERIAVALALRLGITQALSGGNLELVM
LDEPTIHLDSYRRQELIDLLKRMSIIPQMIIVTHDSDLEEAADTILRVKKEKGESFILES
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgataattgaaagcctgacaatgaaaaacttcaaatcacacagggacactcatatagat
tttagcacgggcatatcagtcataatgggagaaaatggggccggaaaatccagtatactt
gaagctgtgagtttcgcactttttaaacagcattctggtaagaaaattgaacagcttatt
aaaataggtcaaaaaaagaagatggttgtggatctccagttccaaacaaacggcagaact
tacctggtttcaagggaacgagataaatcatcctcaaaatctgtactcaagataaaagag
ggaaacaactttcaaacaattttatccggcgaaaaacaggttacaaacgaaattcaaaac
atgctggacatggatggtgacctgtttttaaatgctgtttatgtgaggcagggggaaata
gcagaccttatagacaaagccccatcagaaaaaaaacagatgataggaaaactgttaggg
atagaatcgcttgaaaagacatggaaaaacatgctgccccttattaataactacgaaatt
aaaaaggagaatataactggtagactggagtctatggacggtttgaaggagaatcttaag
tcgaagataattgaaaaggatgacatttcatctaaaattcagattttgaacgttcagatt
gataaaatgggacctgaatttgaattaatgaaagaaaagaaagaacttctggatgagaag
agatctgaatttaaaaggattaaatctgcaatagaatccaaaaaacaacttttgaatcgg
gcagaaaatgataaaaatgttcttaataatgaaataagaactattaaggataaagaagct
gcaatactcagtataaaaccaaaaatcgtaagtctggatattctccatcaattgaaagat
gtatcaagaagcttaaaaaaccttcaagaagatgaaaaaaggattcaaaaaggtttaaaa
gatattcaaaaatttaaaagtattctggatgaaaaccataagttctacagggattatctg
gatattggagatactataaaacttttagaagatgaaagactaaaatttgagggcagcagg
acattgatggaacagtgcacatctcaaaagtctcaggtccaggataagattcagggatcc
acagaaaaaatagttaagggccttaaagctgcaaataaagttttaagaacagatttcagt
cgtgttgaggaacttgaaaatcacataaaatcaatcaaaccttcaacagaagctaaagtg
gaggagatccgtagcaagataaacggtgttcagcaggagatatcaaaccttaaaactcac
aacaaaaaccttgaaaagcccgtaaaagagcttgaaaatgttaaagataagtgtcctgtt
tgtaaatcaaccataagtcctgataaaagagatgagctgattgaaggatatgattgcgag
ataaaaagtaataaagataggatatttcagttagatcatgagttaaaagggcttaaatca
cagaagcatgtgttaacgtcaaagtttgcggagatacagaatataaacgttgacatctta
aaagagcgcattaagacattggaacagagccaaaaggaactggaaagtataagttcagat
ttagaaggtctcgaacctaaagtttcaaagctcaatgagatagattctctcctcaaggag
aaaaaaacaaatcaaaatgaaattaaaggtaaatatgaaagttacataagtgtcaaaggt
tccctggaatcccttggggactataattcaaaaaatgaagatttgaagaagatacaaacc
gaaatcatgtctttgaatgtgaatgttcaccagctgactgaaaaatcaggaaccaattta
aaaaatcttgaatctaagattttggagcttgaaaatctgaaaagtgaatacaatcatctt
tcaggagagatcagccagaaaaattcgctcatagaaaagttagatcttttagacaaggat
ataactggtattaaggaagaaactgtgaagttagacaatgaactggaatccattggatac
aacgaggatattcattccagtctgcaaatgaatctgtacaataaaagtcaagaattaaca
gatttaatcggacaaaaaaaggagctcattgggaaagaaagtgggattttggataggatt
aaggagcttgaatctgaagtagaagtttacggtaaatacaagggggaactcagaaacctc
aaggatttcataaaacttttaaaccatatccgagacctttatggtaaagatggggtgcaa
agagatttaagaaacatttcaaggccacttatagagcagaacacaagagaattctttgaa
aagttcaacttcgaatactcggacataaaactggatgaagattacgatgtaactgtttac
ggccctgcaggaaaaaacagtcttgatatgataagcggaggtgaaaggatagctgttgca
ctggctttaaggctgggaataactcaggctttatccgggggaaacctagaactggtaatg
ttagatgagcccaccatacaccttgattcctacagacgccaggaattaatagatcttcta
aaaagaatgtctataataccgcagatgataattgtaacccatgattcggaccttgaagaa
gctgcagacactattttaagggttaaaaaagagaaaggagaatctttcattttggaatct
taa
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