KEGG   Methanobacterium paludis: MSWAN_0572
Entry
MSWAN_0572        CDS       T01509                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mew  Methanobacterium paludis
Pathway
mew03030  DNA replication
mew03410  Base excision repair
mew03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSWAN_0572
   03410 Base excision repair
    MSWAN_0572
   03450 Non-homologous end-joining
    MSWAN_0572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mew03032]
    MSWAN_0572
   03400 DNA repair and recombination proteins [BR:mew03400]
    MSWAN_0572
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mew04147]
    MSWAN_0572
DNA replication proteins [BR:mew03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSWAN_0572
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSWAN_0572
DNA repair and recombination proteins [BR:mew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSWAN_0572
Exosome [BR:mew04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSWAN_0572
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc EcoRII-C DUF5101 YGR210-like_G4 DUF5817_CT
Other DBs
NCBI-ProteinID: AEG17610
UniProt: F6D5J3
LinkDB
Position
618798..619784
AA seq 328 aa
MGVKFRDIVNPEPLGFNDLNGKIVALDAANVIYQFLSSIRQVDGTPLMDHNKNITSHFSG
ILYRTSSLIEKGIKPVYVFDGISSYLKKGTQAKRREVKEKSEKRWKAALDEGNTEEARKY
AVRSSRMSSDVIEGSKKLLSLMGIPHIQAMGEGEAQASYMVEKGDAWCVGSQDYDCVLFG
ATRMVKNLTITGGKANLELIELKKVLERLEITREQLIDVAILAGTDFNEGVKGIGAKKGL
KLVKEHGDIFNILDHMKIELEVDPNILRDMFLKHDVLTDYELKWRSPDKSGVIDYLCGDH
DFSEDRVSSALEKLKKLDMNQSSLEKWF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgggtgtaaaatttagagatatcgtaaatccagagcccctaggatttaacgatttaaat
gggaaaatagtagcactggatgcggccaatgttatataccagttcttatccagcataagg
caggttgatggtactcctttaatggatcataataaaaatataacttcacatttcagtgga
atcctttacaggacatcatctcttatagaaaagggaataaaaccagtttatgtctttgat
ggtatatcaagttatcttaaaaagggtactcaagctaaaaggagagaagtgaaggaaaaa
tctgaaaaaaggtggaaagcagcccttgatgaaggtaatactgaagaagcaagaaaatac
gcggttagatcctcaagaatgtcttctgatgtaatagaaggttctaaaaagctgttgagt
cttatgggaattccacatattcaggcaatgggtgaaggtgaagcccaagcatcgtatatg
gttgaaaagggtgatgcatggtgtgtgggatcccaggactatgattgtgtactttttggt
gcaacgaggatggttaagaacctgacaataaccgggggaaaggccaaccttgaacttatc
gagcttaaaaaagttttagaaaggcttgaaataacaagagaacagctcattgacgttgca
atacttgcaggtacggacttcaacgagggtgtgaagggaataggggctaaaaaaggttta
aaacttgtgaaagaacatggggacatatttaacattcttgatcacatgaaaatagagtta
gaagtggatccaaatattttgagggacatgtttttaaaacatgatgttttaaccgattat
gaattaaaatggagaagtccagataagagtggagtaattgattacctatgtggggaccat
gatttttcagaggatcgcgtcagcagtgcgttagaaaaacttaaaaaactcgatatgaac
cagagcagtctggaaaagtggttctaa

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