Methanobacterium paludis: MSWAN_1207
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Entry
MSWAN_1207 CDS
T01509
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mew
Methanobacterium paludis
Pathway
mew03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSWAN_1207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mew03021
]
MSWAN_1207
Transcription machinery [BR:
mew03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSWAN_1207
Prokaryotic type
Archaeal type
TFE
MSWAN_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
GntR
ADK_lid
HypA
TrmB
Sigma70_r3
HTH_Cmi2_C
STI1-HOP_DP
Rrf2
Zn_Ribbon_TF
DUF7129
Zn_Tnp_IS91
Sigma70_r4_2
Zn_Ribbon_YjdM
Zn_ribbon_IS1595
DncV_C
Motif
Other DBs
NCBI-ProteinID:
AEG18224
UniProt:
F6D5P2
LinkDB
All DBs
Position
1287685..1288242
Genome browser
AA seq
185 aa
AA seq
DB search
MPNTNSSTIPDLDTPHDKGGVEMLSDPVVQEILMDITNDEKTLSIIECILNGKTREEEIA
EELGIKLNLVRKVLYKLYDAGVATYRRSKDPETQWFTYSWKFDEEKVHQIITKKYEKFSR
EIEESLEYEEGNMFFLCRANGHRYNFEEASKNNFKCPKCGGTLEYQDNSTIILELKQMME
KNQVA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcccaataccaatagttcgactattccggatttagatacaccacatgataaaggaggg
gtagaaatgcttagtgatcctgtagttcaagaaattttaatggatattaccaatgatgaa
aaaactctttcaatcattgaatgtattttgaatggtaaaacacgtgaggaagaaattgca
gaagaacttggaataaagttaaacctcgtaagaaaggtgctatacaaattatatgatgcg
ggagtagcaacttacagaagaagcaaggaccctgaaacacaatggttcacttatagttgg
aaatttgatgaagaaaaggtacaccagataataaccaaaaaatatgaaaagttctcaagg
gaaattgaagaatccctggagtacgaagaagggaacatgttctttttgtgccgtgccaac
ggccatagatacaactttgaagaagcatcaaaaaacaacttcaaatgtccaaaatgtgga
ggtacacttgagtatcaggacaactccaccataatactggaactgaaacagatgatggaa
aaaaatcaggtagcttaa
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