KEGG   Methanobacterium paludis: MSWAN_1207
Entry
MSWAN_1207        CDS       T01509                                 
Name
(GenBank) Transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mew  Methanobacterium paludis
Pathway
mew03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSWAN_1207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mew03021]
    MSWAN_1207
Transcription machinery [BR:mew03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSWAN_1207
 Prokaryotic type
  Archaeal type
    TFE
     MSWAN_1207
SSDB
Motif
Pfam: TFIIE_alpha Rad50_zn_hook GntR ADK_lid HypA TrmB Sigma70_r3 HTH_Cmi2_C STI1-HOP_DP Rrf2 Zn_Ribbon_TF DUF7129 Zn_Tnp_IS91 Sigma70_r4_2 Zn_Ribbon_YjdM Zn_ribbon_IS1595 DncV_C
Other DBs
NCBI-ProteinID: AEG18224
UniProt: F6D5P2
LinkDB
Position
1287685..1288242
AA seq 185 aa
MPNTNSSTIPDLDTPHDKGGVEMLSDPVVQEILMDITNDEKTLSIIECILNGKTREEEIA
EELGIKLNLVRKVLYKLYDAGVATYRRSKDPETQWFTYSWKFDEEKVHQIITKKYEKFSR
EIEESLEYEEGNMFFLCRANGHRYNFEEASKNNFKCPKCGGTLEYQDNSTIILELKQMME
KNQVA
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcccaataccaatagttcgactattccggatttagatacaccacatgataaaggaggg
gtagaaatgcttagtgatcctgtagttcaagaaattttaatggatattaccaatgatgaa
aaaactctttcaatcattgaatgtattttgaatggtaaaacacgtgaggaagaaattgca
gaagaacttggaataaagttaaacctcgtaagaaaggtgctatacaaattatatgatgcg
ggagtagcaacttacagaagaagcaaggaccctgaaacacaatggttcacttatagttgg
aaatttgatgaagaaaaggtacaccagataataaccaaaaaatatgaaaagttctcaagg
gaaattgaagaatccctggagtacgaagaagggaacatgttctttttgtgccgtgccaac
ggccatagatacaactttgaagaagcatcaaaaaacaacttcaaatgtccaaaatgtgga
ggtacacttgagtatcaggacaactccaccataatactggaactgaaacagatgatggaa
aaaaatcaggtagcttaa

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