KEGG   Methanobacterium paludis: MSWAN_1498
Entry
MSWAN_1498        CDS       T01509                                 
Name
(GenBank) CRISPR locus-related DNA-binding protein
  KO
K07725  CRISPR-associated protein Csa3
Organism
mew  Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:mew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mew03000]
    MSWAN_1498
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mew02048]
    MSWAN_1498
Transcription factors [BR:mew03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    MSWAN_1498
Prokaryotic defense system [BR:mew02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    MSWAN_1498
SSDB
Motif
Pfam: DUF6293 HTH_24 HTH_5 HTH_20 DUF1887 Cas_Cas02710 HTH_11 TrmB Cas_APE2256 MarR HTH_28 HTH_IclR HTH_36 Cas_NE0113 HxlR MarR_2
Other DBs
NCBI-ProteinID: AEG18512
UniProt: F6D7Y9
LinkDB
Position
1607975..1608568
AA seq 197 aa
MDYTLISTIYAIEPVMVCITNFSPKKVVLLREEDAPKDKLKVEGILQDTVGKFIEIENKI
TSLYDVVRVAKDTVEIIEAENALGRKIVVNISGGRKPQALGALFGCYARHKMIERIVYVT
EEDSHILDLPILNFGISETKLMVLEELKKGETSVKNLAIRIGISRGMTYNHIRELREMGF
IAPDTLEITTAGKLAVI
NT seq 594 nt   +upstreamnt  +downstreamnt
atggattataccttaatatcgacaatttacgcaatagaacccgttatggtttgtataacg
aatttttcccccaaaaaagttgttcttttaagggaagaagacgcaccaaaggacaaactc
aaagtagaaggaatacttcaagatactgttggaaagttcatagaaatagaaaacaaaata
acaagcctttacgatgttgtaagggttgccaaagatactgtagagataatcgaagctgaa
aatgctttgggcagaaagatagttgtgaacataagtggaggaaggaaaccccaggcactt
ggagctcttttcggctgctacgctaggcataaaatgatagagagaatagtttacgtcaca
gaagaagacagccacattctggaccttccaatactcaacttcggaatatctgaaaccaaa
ttaatggtacttgaagagcttaaaaagggagagacctcggttaaaaaccttgcaatcaga
ataggaataagcagaggaatgacctataatcacatcagagaactgagggaaatgggcttc
atagccccggacacacttgaaatcacaaccgcaggaaaacttgcagttatttaa

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