Methanobacterium paludis: MSWAN_1745
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Entry
MSWAN_1745 CDS
T01509
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mew
Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mew03016
]
MSWAN_1745
Enzymes [BR:
mew01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSWAN_1745
Transfer RNA biogenesis [BR:
mew03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSWAN_1745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AEG18756
UniProt:
F6D3V4
LinkDB
All DBs
Position
1840360..1840863
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AA seq
167 aa
AA seq
DB search
MNSKLSGDLVIIEENKGAKLHEKSHYGNVTEEGLQLSLIEALYLMEKDKLEILSDDKELS
LDEMFELIRSKNLFTMYIVFRDLKNRGYIVKTGFKYGSEFRLYERGKSPGDGHSNYLVKV
APENCTMTMFDLSSYVRVAHGVNKKLLFAVVDDENDITYYNMEWTRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagttatccggagatttagtgatcatagaagaaaataaaggagcaaaactc
cacgaaaaaagccactacggtaacgttacagaggaaggattacagctttcactcattgaa
gcactttatttaatggaaaaggataagttagaaattttaagtgacgataaagaactttct
ctagatgagatgttcgaattaatccgcagcaaaaaccttttcacaatgtacatcgtattc
cgggacctcaaaaatagaggttatattgttaaaacaggtttcaagtacggttctgagttc
agattgtatgaaagaggaaaatctccaggagacggccattcaaattaccttgtaaaggtt
gcacctgaaaactgtacaatgacaatgtttgatctgtccagctacgtaagagtggcccat
ggagtaaacaaaaaactcttattcgctgttgtggatgatgaaaacgatataacttactat
aacatggaatggacgcgtccgtaa
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