Methanobacterium paludis: MSWAN_1829
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Entry
MSWAN_1829 CDS
T01509
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mew
Methanobacterium paludis
Pathway
mew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSWAN_1829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mew03019
]
MSWAN_1829
03009 Ribosome biogenesis [BR:
mew03009
]
MSWAN_1829
04131 Membrane trafficking [BR:
mew04131
]
MSWAN_1829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mew04147
]
MSWAN_1829
Messenger RNA biogenesis [BR:
mew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSWAN_1829
Ribosome biogenesis [BR:
mew03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSWAN_1829
Membrane trafficking [BR:
mew04131
]
SNARE
SNARE associated proteins
Others
MSWAN_1829
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSWAN_1829
Exosome [BR:
mew04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSWAN_1829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_2
AAA_14
AAA_5
TIP49
AAA_22
AAA_33
nSTAND3
AAA_28
AAA_lid_PRS2_C
NPHP3_N
AAA_18
Mg_chelatase
Zeta_toxin
RNA_helicase
AAA_7
Sigma54_activat
ABC_tran
AAA_3
IstB_IS21
nSTAND_NTPase5
ATPase
DUF815
Viral_helicase1
AAA_19
AAA_17
Vps4_C
Bac_DnaA
Parvo_NS1
AAA_24
SLFN-g3_helicase
ORC-CDC6-like
CPT
Motif
Other DBs
NCBI-ProteinID:
AEG18840
UniProt:
F6D4W9
LinkDB
All DBs
Position
complement(1915848..1918133)
Genome browser
AA seq
761 aa
AA seq
DB search
MPQNGEIELRVAEALQQDVGKGIVRVDKELLGKIDIVPGNLVEIMGKRSTGAIVGEAYPA
DVGLEIIRMDGLTRSNAGTSISEMVTIRKTELKEATKVILAPATKGIRIMAPGEILKKNL
MGRSVSKGDVLALISPRKTRETFREFPDVESVFSGFFEASTPFSLGEIKFTVVSTSPTGI
VRITDVTEIEIRPEAVELIEKKIPDVTYDDVGGLKPEISKLREMVELPLRHPEIFDRLGI
DPPKGVLLHGSPGTGKTLIAKALANESDANFMAINGPEIMSKFVGEAEKRIRDFFKQAED
EAPSIIFIDEIDAIAPRREEVTGEVERRVVAQILSLMDGLKERGKVIVVGATNRPDALDP
ALRRPGRFDREIGLRVPDKDGRCEILQIHTRGMPLADDVELNEFSSITHGFVGADLAALC
REAAMNALRRILPDIDLEEQTIPKEVLEKLFVTKNDFMDALKFINPSALREVFIEIPNIH
WKDIGGLNELKQSLKEAVEWPLNHPDAFKRIGIEPPKGILLFGPPGTGKTMLSKAVATES
RANFISVKGSEILSKWFGESERKISEIFNKAKQASPCIVFFDELDALASMRGSGAGEPRV
VERMVNTLLSEMDGLEELKGVVVLGATNRPDLLDSALLRPGRFDEIVLVPPPDEKSRIEI
FRVHMEGMSLDDDVDIEKLAKKTDGYSGADIAAVCRKAGMLALHDNIEIKSVSPKHFKKA
LKKIGPSLTSEVIKYYKHLTKELERGIEVRNEREEIPREVA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcaaaacggtgaaatagaacttagagtggccgaagccttgcagcaagatgtgggt
aaaggtattgtaagggtagataaggaacttcttggtaaaattgacattgtcccaggaaac
ctggttgaaataatgggtaaaagatcaactggtgccatagttggagaagcttaccctgca
gatgttggccttgaaataattaggatggacggtctcacacggtcaaatgcaggaacatct
atcagtgaaatggtaacgatacgaaagacagagctcaaagaagcaacaaaagtgatttta
gccccagcaacaaagggtatacgtataatggcaccaggagaaatcttaaagaaaaattta
atgggaagatcagtttccaagggtgatgttttagctttgatatctcccagaaaaaccagg
gaaacattcagggagttcccagatgttgaaagtgtattcagcggattttttgaagcatca
actccattttcacttggtgaaattaaattcacagttgtatcaacaagccctacgggtatc
gttaggatcacagatgtaactgaaattgaaatcagaccagaagctgtggaactcattgaa
aaaaagattcctgatgttacgtatgacgatgttggaggcctgaaacctgaaatatccaaa
ttaagagagatggtagaacttccactccgtcatcctgagatatttgacaggttaggtatt
gacccacctaagggagttcttttacatggttctccaggaacaggaaagactcttattgca
aaagccctggccaatgagagtgatgcaaatttcatggccataaatggccctgaaataatg
agtaaatttgttggagaagctgaaaaaaggataagagattttttcaagcaagccgaggat
gaagcaccctccattatttttatagatgagatagatgccatagctcccagaagagaagaa
gtaacaggagaagtggaaaggagagtcgtagcccagatattatctttaatggacggatta
aaagaaaggggaaaggtaattgttgttggggctactaacaggcctgatgcccttgaccca
gcactcagaaggccaggaaggtttgacagggagatagggcttcgagttccagacaaagac
ggaagatgtgaaattctccagatccacacaaggggcatgcctctggcagatgatgtcgaa
ctgaatgaattttcaagtataacccatggatttgtaggggcagatcttgcagcactctgc
cgtgaagctgcaatgaacgcacttagaaggattctaccagatatagaccttgaagagcag
acaattcccaaagaagttctggaaaaactcttcgtaaccaagaatgattttatggacgct
ctaaaattcataaatccctctgcactgagggaagtattcattgaaattccaaatattcat
tggaaagatataggggggctgaatgagttgaaacagtccttaaaagaagctgtggaatgg
cctcttaaccatcctgatgcttttaaaaggattggaattgaaccacccaaaggaatacta
ctctttggaccaccaggtacaggtaagaccatgctttctaaggcagtggcaacagaatct
agggccaacttcataagcgttaaaggttcggagatacttagtaaatggtttggagaatct
gaacggaagatatctgaaatattcaacaaggctaaacaggcttcaccatgtatcgtgttt
tttgatgagctggatgcgctggcatcgatgaggggttcaggagcaggtgaaccaagggtt
gtggaacgaatggtgaacactctactttcagagatggacggtcttgaagagttgaagggt
gttgttgttcttggagctacaaacaggcccgatcttcttgattctgcgcttttacgtcct
ggacggtttgatgagatagttcttgtacctccaccagatgaaaaatctcgtatagagata
ttccgggtccatatggaaggaatgtccctggatgatgatgtggatattgaaaaactggct
aaaaaaacagatggatactctggggcagatatagctgctgtgtgcagaaaagcaggtatg
cttgccctgcatgataacatagaaattaagagtgtttctccaaaacattttaaaaaggct
ttgaaaaaaattggaccttcattaacatcagaggtcataaaatattacaagcatttaacc
aaagaacttgaaaggggtattgaggttagaaatgaaagggaagaaattccaagggaagtg
gcatag
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